Evidence map›Paper›PMID 36515500›Full record

ArticleACS sensors2022

Extracellular Vesicle Antibody Microarray for Multiplexed Inner and Outer Protein Analysis.

Rosalie Martel, Molly L Shen, Philippe DeCorwin-Martin, Lorenna Oliveira Fernandes de Araujo, David Juncker

Open access · bronzeAbstract read
In one paragraph

Article in ACS sensors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Rosalie MartelBiomedical Engineering Department, McGill University, Montreal, Quebec H3A 2B4, Canada.ORCID 0000-0003-0314-2584
Molly L ShenBiomedical Engineering Department, McGill University, Montreal, Quebec H3A 2B4, Canada.
Philippe DeCorwin-MartinBiomedical Engineering Department, McGill University, Montreal, Quebec H3A 2B4, Canada.ORCID 0000-0001-8132-1102
Lorenna Oliveira Fernandes de AraujoBiomedical Engineering Department, McGill University, Montreal, Quebec H3A 2B4, Canada.
David JunckerBiomedical Engineering Department, McGill University, Montreal, Quebec H3A 2B4, Canada.ORCID 0000-0002-7313-1162
McGill Genome Centre · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins are found both outside and inside of extracellular vesicles (EVs) and govern the properties and functions of EVs, while also constituting a signature of the cell of origin and of biological function and disease. Outer proteins on EVs can be directly bound by antibodies to either enrich EVs, or probe the expression of a protein on EVs, including in a combinatorial manner. However, co-profiling of inner proteins remains challenging. Here, we present the high-throughput, multiplexed analysis of EV inner and outer proteins (EVPio). We describe the optimization of fixation and heat-induced protein epitope retrieval for EVs, along with oligo-barcoded antibodies and branched DNA signal amplification for sensitive, multiplexed, and high-throughput assays. We captured four subpopulations of EVs from colorectal cancer (CRC) cell lines HT29 and SW403 based on EpCAM, CD9, CD63, and CD81 expression, and quantified the co-expression of eight outer [integrins (ITGs) and tetraspanins] and four inner (heat shock, endosomal, and inner leaflet) proteins. The differences in co-expression patterns were consistent with the literature and known biological function. In conclusion, EVPio analysis can simultaneously detect multiple inner and outer proteins in EVs immobilized on a surface, opening the way to extensive combinatorial protein profiles for both discovery and clinical translation.

Indexed as

Extracellular VesiclesAntibodiesAntibodiesbarcodingbranched DNA amplificationextracellular vesiclesmicroarraysprotein analysis

Identifiers

PMID36515500
PMCPMC9791990
OpenAlexW4311404624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.