Evidence map›Paper›PMID 36514136›Full record

ArticleOne health outlook2022

Evidence of orthohantavirus and leptospira infections in small mammals in an endemic area of Gampaha district in Sri Lanka.

N P Sunil-Chandra, Åsa Fahlman, Shantha Waidyarathna, Jonas Näslund, M V M L Jayasundara, Lwande Olivia Wesula, Göran Bucht

Open access · goldAbstract read
In one paragraph

Article in One health outlook, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

N P Sunil-ChandraDepartment of Medical Microbiology, Faculty of Medicine, University of Kelaniya, Ragama, Sri Lanka. sunilchandra@kln.ac.lk.ORCID http://orcid.org/0000-0003-2640-783X
Åsa FahlmanSwedish Biodiversity Centre, Department of Rural and Urban Development, Faculty of Natural Resources and Agricultural Sciences, Swedish University of Agricultural Sciences, P.O. Box 7016, SE-750 07, Uppsala, Sweden.
Shantha WaidyarathnaDepartment of Medical Microbiology, Faculty of Medicine, University of Kelaniya, Ragama, Sri Lanka.
Jonas NäslundSwedish Defence Research Agency, CBRN Defence and Security, Umeå, Sweden.
M V M L JayasundaraDepartment of Medical Microbiology, Faculty of Medicine, University of Kelaniya, Ragama, Sri Lanka.
Lwande Olivia WesulaDepartment of Clinical Microbiology, Section for Virology, Umeå University, SE-901 85, Umeå, Sweden.
Göran BuchtSwedish Defence Research Agency, CBRN Defence and Security, Umeå, Sweden.
University of Kelaniya · LKSwedish Defence Research Agency · SESwedish University of Agricultural Sciences · SEUmeå University · SE

Funding

Swedish Research Council 2017-05479Swedish Research Links Program 2013-6722
6 · The paper itself

Abstract

backgroundOrthohantaviruses and leptospira are emerging zoonotic pathogens of high public health significance. The epidemiology of orthohantavirus infections and leptospirosis is similar and presents related clinical pictures in humans. However, a paucity of data on actual reservoir hosts for orthohantaviruses and leptospira exists. Therefore, this study aimed at determining the occurrence of orthohantaviruses and leptospira in small mammals captured in an endemic region of Sri Lanka.

methodsRodents and shrews were morphologically and/or genetically identified using morphological keys and DNA barcoding techniques targeting the cytochrome oxidase b subunit gene (Cytb). Lung tissues and sera were subsequently analyzed for the presence of orthohantavirus RNA using qRT-PCR. Sera of rats were tested for IgG antibodies against orthohantaviruses and leptospira.

resultsForty-three (43) small mammals representing: Rattus (R.) rattus (black rat) or R. tanezumi (Asian rat), Suncus murinus (Asian house shrew), R. norvegicus (brown rat) and Mus musculus (house mouse) were investigated. No orthohantavirus RNA was detected from the lung tissue or serum samples of these animals. Elevated levels of IgG antibodies against Puumala orthohantavirus (PUUV) and/or Seoul orthohantavirus (SEOV) antigens were detected in sera of 28 (72%) out of the 39 rats analysed. Interestingly, 36 (92%) of the 39 rats also showed presence of anti leptospira-IgG antibodies in their serum, representing dual infection or dual exposure in 26/39 (66.7%) of examined rats.

conclusionsThis project targets important public health questions concerning the occupational risk of orthohantavirus infections and/or leptospirosis in an endemic region of Sri Lanka. Most rats (72%) in our study displayed antibodies reacting to orthohantavirus NP antigens, related to PUUV and/or SEOV. No correlation between the orthohantavirus and leptospira IgG antibody levels were noticed. Finally, a combination of both morphological and DNA barcoding approaches revealed that several species of rats may play a role in the maintenance and transmission of orthohantavirus and leptospira in Sri Lanka.

Indexed as

LeptospiraOrthohantavirusRodentsShrewsSri Lanka

Identifiers

PMID36514136
PMCPMC9749280
OpenAlexW4311301688

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.