Evidence map›Paper›PMID 36513413›Full record

ArticleJournal of advanced research2022

Taxonomical and functional composition of strawberry microbiome is genotype-dependent.

Daniela Sangiorgio, Antonio Cellini, Irene Donati, Erika Ferrari, Benjawan Tanunchai, Sara Fareed Mohamed Wahdan, Dolaya Sadubsarn, Brian Farneti, Alice Checcucci, François Buscot and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of advanced research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  5. Effect of a bioformulation with nativeFrontiers in microbiology · 2026
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  14. Fungal Mycobiome of Mature Strawberry Fruits (Foods (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Daniela SangiorgioDepartment of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum - University of Bologna, viale Fanin 46, 40127 Bologna, Italy.
Antonio CelliniDepartment of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum - University of Bologna, viale Fanin 46, 40127 Bologna, Italy.
Irene DonatiZespri Fresh Produce, Italy.
Erika FerrariDepartment of Chemical and Geological Sciences, University of Modena and Reggio Emilia, via Campi 103, 41125 Modena, Italy.
Benjawan TanunchaiUFZ-Helmholtz Centre for Environmental Research, Department of Soil Ecology, Theodor-Lieser-Str. 4, D-06120 Halle (Saale), Germany.
Sara Fareed Mohamed WahdanUFZ-Helmholtz Centre for Environmental Research, Department of Soil Ecology, Theodor-Lieser-Str. 4, D-06120 Halle (Saale), Germany; Department of Botany, Faculty of Science, Suez Canal University, 41522 Ismailia, Egypt.
Dolaya SadubsarnUFZ-Helmholtz Centre for Environmental Research, Department of Soil Ecology, Theodor-Lieser-Str. 4, D-06120 Halle (Saale), Germany.
Brian FarnetiFondazione Edmund Mach, Research and Innovation Centre, Via E. Mach 1, 38010, S. Michele all'Adige, TN, Italy.
Alice CheccucciDepartment of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum - University of Bologna, viale Fanin 46, 40127 Bologna, Italy.
François BuscotUFZ-Helmholtz Centre for Environmental Research, Department of Soil Ecology, Theodor-Lieser-Str. 4, D-06120 Halle (Saale), Germany; German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Deutscher Platz 5e, D-04103 Leipzig, Germany.
Francesco SpinelliDepartment of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum - University of Bologna, viale Fanin 46, 40127 Bologna, Italy. Electronic address: francesco.spinelli3@unibo.it.
Witoon PurahongUFZ-Helmholtz Centre for Environmental Research, Department of Soil Ecology, Theodor-Lieser-Str. 4, D-06120 Halle (Saale), Germany. Electronic address: witoon.purahong@ufz.de.
Helmholtz Centre for Environmental Research · DEUniversity of Bologna · ITFondazione Edmund Mach · ITSuez Canal University · EGUniversity of Modena and Reggio Emilia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionSpecific microbial communities are associated to host plants, influencing their phenotype and fitness.Despite the rising interest in plant microbiome, the role of microbial communities associated with perennial fruit plants remains overlooked.

objectivesThis work provides the first comprehensive descriptionof the taxonomical and functional bacterial and fungal microbiota of below- and above-ground organsof three commercially important strawberry genotypes under cultural conditions.

methodsStrawberry-associatedfungal and bacterial microbiomes were characterised by Next-Generation Sequencing and the potential functions expressed by the bacterial microbiome were analysed by both in silico and in vitro characterisation of plant growth-promoting abilities of native bacteria. Additionally, the association between the strawberry microbiome, plant disease tolerance, plant mineral nutrient content, and fruit quality was investigated.

resultsResults showed that thestrawberry core microbiome included 24 bacteria and 15 fungal operational taxonomicunits (OTUs).However, plant organ and genotype had a significant role in determining the taxonomical and functional composition of microbial communities. Interestingly, the cultivar with the highesttolerance against powdery mildew and leaf spot and the highest fruit productivity was the only one able to ubiquitously recruit the beneficial bacterium, Pseudomonasfluorescens, and to establish a mutualistic symbiosis with the arbuscular mycorrhizaRhizophagus irregularis.

conclusionThis work sheds light on the interaction of cultivated strawberry genotypes with a variety of microbes and highlights the importance of their applications to increase the sustainability of fruit crop production.

Indexed as

FragariaMicrobiotaBacteriaGenotypeSymbiosisFragaria x ananassaHolobiontPhyllospherePlant growth-promoting bacteriaPseudomonas fluorescensRhizophagus irregularis

Identifiers

PMID36513413
PMCPMC9788945
OpenAlexW4213015832

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.