Evidence map›Paper›PMID 36512211›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Monitoring Effects of Membrane Traffic Via Changes in Cell Polarity and Morphogenesis in Three-Dimensional Human Pluripotent Stem Cell Cysts.

Maha M Hamed, Kenichiro Taniguchi, Mara C Duncan

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Maha M HamedCellular and Molecular Biology Program, University of Michigan, Ann Arbor, MI, USA.
Kenichiro TaniguchiDepartment of Cell Biology, Neurobiology and Anatomy, Department of Pediatrics, Medical College of Wisconsin, Milwaukee, WI, USA.
Mara C DuncanDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, USA. mcduncan@umich.edu.
University of Michigan–Ann Arbor · USMedical College of Wisconsin · US

Funding

Michigan Institute for Clinical and Health Research (MICHR)UL1TR002240 · NCATS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUMENG, JULIE C, MASHOUR, GEORGE ALEXANDER · 2017 to 2022
$54.9M
CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
The systems biology of mitotic checkpoint signaling and its relevance to cancer cell biologyR35GM126983 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Ajit Joglekar · 2018 to 2026
$5.1M
Molecular regulators of human amniogenesisR01HD098231 · NICHD · MEDICAL COLLEGE OF WISCONSIN · PI Kenichiro Taniguchi · 2019 to 2026
$3.3M
Mechanism of apicosome-driven lumen formation during human and mouse embryogenesisR01HD102496 · NICHD · MEDICAL COLLEGE OF WISCONSIN · PI TANIGUCHI, KENICHIRO · 2020 to 2024
$1.9M
Characterizing new proteins that determine AP-1 recruitment and distributionR01GM129255 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DUNCAN, MARA C · 2019 to 2022
$1.2M
NCATS NIH HHS UL1 TR002240NICHD NIH HHS R01 HD098231NICHD NIH HHS R01 HD102496NIGMS NIH HHS R01 GM129255NIGMS NIH HHS R35 GM126983NIGMS NIH HHS T32 GM007315
6 · The paper itself

Abstract

Membrane traffic at the Golgi and endosomes plays many critical roles in the polarization and the morphogenesis of epithelial tissues. Studies into the roles of traffic in morphogenesis in mammals are often complicated by early embryonic lethality of mutations in membrane traffic as well as the inherent difficulty in imaging developing embryos posed by their size and location. Increasingly, human pluripotent stem cell (hPSC)-derived embryo- and organ-like systems (e.g., embryoids, organoids) provide a useful platform to illuminate the requirements of traffic in human embryonic tissue morphogenesis because these in vitro models are highly amenable to fluorescence microscopy and provide the ability to examine the role of essential genes not possible with animal studies. Here, we present a method to generate hPSC-cysts, a 3-D hPSC-based model of human epiblast lumen formation. This system provides unique opportunities to examine the role of membrane traffic during epithelial morphogenesis. We also present methods to process hPSC-cysts for immunofluorescence and staining with commonly used fluorescence labels useful for detecting defects in polarization and morphogenesis caused by defects in membrane traffic.

Indexed as

CystsPluripotent Stem CellsAnimalsCell DifferentiationCell PolarityHumansMammalsMorphogenesisOrganoidsEndosomesGolgihiPSChPSCImmunofluorescenceLumenMembrane trafficMethodPolarityStem cells

Identifiers

PMID36512211
PMCPMC10276343
OpenAlexW4311346640

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.