Evidence map›Paper›PMID 36510318›Full record

ArticleBiotechnology for biofuels and bioproducts2022

Characterization of two 1,3-β-glucan-modifying enzymes from Penicillium sumatraense reveals new insights into 1,3-β-glucan metabolism of fungal saprotrophs.

Valentina Scafati, Francesca Troilo, Sara Ponziani, Moira Giovannoni, Anna Scortica, Daniela Pontiggia, Francesco Angelucci, Adele Di Matteo, Benedetta Mattei, Manuel Benedetti

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Valentina Scafati *Department of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy.
Francesca Troilo *Institute of Molecular Biology and Pathology, CNR, P.Le Aldo Moro 5, 00185, Rome, Italy.
Sara PonzianiDepartment of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy.
Moira GiovannoniDepartment of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy.
Anna ScorticaDepartment of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy.
Daniela PontiggiaDepartment of Biology and Biotechnology "Charles Darwin", Sapienza University of Rome, 00185, Rome, Italy.
Francesco AngelucciDepartment of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy.
Adele Di MatteoInstitute of Molecular Biology and Pathology, CNR, P.Le Aldo Moro 5, 00185, Rome, Italy. adele.dimatteo@cnr.it.
Benedetta MatteiDepartment of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy. mariabenedetta.mattei@univaq.it.
Manuel BenedettiDepartment of Life, Health and Environmental Sciences, University of L'Aquila, 67100, L'Aquila, Italy.
University of L'Aquila · ITInstitute of Molecular Biology and Pathology · ITSapienza University of Rome · IT

Funding

Ministero dell'Università e della Ricerca PRIN 2017ZBBYNC
6 · The paper itself

Abstract

background1,3-β-glucan is a polysaccharide widely distributed in the cell wall of several phylogenetically distant organisms, such as bacteria, fungi, plants and microalgae. The presence of highly active 1,3-β-glucanases in fungi evokes the biological question on how these organisms can efficiently metabolize exogenous sources of 1,3-β-glucan without incurring in autolysis.

resultsTo elucidate the molecular mechanisms at the basis of 1,3-β-glucan metabolism in fungal saprotrophs, the putative exo-1,3-β-glucanase G9376 and a truncated form of the putative glucan endo-1,3-β-glucosidase (ΔG7048) from Penicillium sumatraense AQ67100 were heterologously expressed in Pichia pastoris and characterized both in terms of activity and structure. G9376 efficiently converted laminarin and 1,3-β-glucan oligomers into glucose by acting as an exo-glycosidase, whereas G7048 displayed a 1,3-β-transglucanase/branching activity toward 1,3-β-glucan oligomers with a degree of polymerization higher than 5, making these oligomers more recalcitrant to the hydrolysis acted by exo-1,3-β-glucanase G9376. The X-ray crystallographic structure of the catalytic domain of G7048, solved at 1.9 Å of resolution, consists of a (β/α)

conclusionsThe antagonizing activity between ΔG7048 and G9376 indicates how opportunistic fungi belonging to Penicillium genus can feed on substrates similar for composition and structure to their own cell wall without incurring in a self-deleterious autohydrolysis.

Indexed as

1,3-β-Glucan metabolism1,3-β-TransglucanaseCell wall-modifying enzymesExo-1,3-β-glucanasePenicilliumTIM-barrel

Identifiers

PMID36510318
PMCPMC9745967
OpenAlexW4311577583

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.