ArticleBMC genomics2022
Genome-wide identification of BBX gene family and their expression patterns under salt stress in soybean.
Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed, 22 citations in OpenAlex.
- Article
- Functional Characterization ofInternational journal of molecular sciences · 2026Article
- Evolutionary and functional characterization of BBX genes in the barley pangenome.BMC plant biology · 2026Article
- Genome-wide identification of the BBX gene family in kiwifruit and analysis of its expression responses to multiple types of stress.BMC genomics · 2026Article
- Genome-Wide Identification and Expression Analysis of the Melon B-BOX (BBX) Gene Family in Response to Abiotic and Biotic Stresses.Plants (Basel, Switzerland) · 2025Article
- Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2025Article
- Article
- Transcript-Wide Identification and Characterization of the BBX Gene Family inPlants (Basel, Switzerland) · 2025Article
- Evolutionary dynamics and functional diversification of BBX transcription factors in CFrontiers in plant science · 2025Article
- Molecular Functional and Transcriptome Analysis ofPlants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification of PeanutPlants (Basel, Switzerland) · 2024Article
- Role ofFrontiers in plant science · 2024Article
- Genome-wide analysis of blueberry B-box family genes and identification of members activated by abiotic stress.BMC genomics · 2023Article
- Genome-wide identification and expression analysis of theFrontiers in plant science · 2023Article
- Genome-wide identification of actin-depolymerizing factor gene family and their expression patterns under various abiotic stresses in soybean (Frontiers in plant science · 2023Article
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundBBX genes are key players in the regulation of various developmental processes and stress responses, which have been identified and functionally characterized in many plant species. However, our understanding of BBX family was greatly limited in soybean.
resultsIn this study, 59 BBX genes were identified and characterized in soybean, which can be phylogenetically classified into 5 groups. GmBBXs showed diverse gene structures and motif compositions among the groups and similar within each group. Noticeably, synteny analysis suggested that segmental duplication contributed to the expansion of GmBBX family. Moreover, our RNA-Seq data indicated that 59 GmBBXs showed different transcript profiling under salt stress, and qRT-PCR analysis confirmed their expression patterns. Among them, 22 GmBBXs were transcriptionally altered with more than two-fold changes by salt stress, supporting that GmBBXs play important roles in soybean tolerance to salt stress. Additionally, Computational assay suggested that GmBBXs might potentially interact with GmGI3, GmTOE1b, GmCOP1, GmCHI and GmCRY, while eight types of transcription factors showed potentials to bind the promoter regions of GmBBX genes.
conclusionsFifty-nine BBX genes were identified and characterized in soybean, and their expression patterns under salt stress and computational assays suggested their functional roles in response to salt stress. These findings will contribute to future research in regard to functions and regulatory mechanisms of soybean BBX genes in response to salt stress.
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