Evidence map›Paper›PMID 36509735›Full record

ArticleNature communications2022

Dynamics of extended-spectrum cephalosporin resistance genes in Escherichia coli from Europe and North America.

Roxana Zamudio, Patrick Boerlin, Racha Beyrouthy, Jean-Yves Madec, Stefan Schwarz, Michael R Mulvey, George G Zhanel, Ashley Cormier, Gabhan Chalmers, Richard Bonnet and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  3. Comparison of three immunochromatographic assays for the rapid detection of CTX-M in Enterobacterales.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
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  9. Genomic epidemiology of third-generation cephalosporin-resistantOne health (Amsterdam, Netherlands) · 2025
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  10. A plasmid with theMicrobiology (Reading, England) · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
  15. MAST® D72C test: a novel option for ESBL, AmpC and carbapenemase detection.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  16. Detecting Class 1 Integrons and Their Variable Regions inAntibiotics (Basel, Switzerland) · 2024
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  17. Comparison of IncK-Antibiotics (Basel, Switzerland) · 2024
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  18. A Retrospective Analysis ofMicroorganisms · 2024
    Article
  19. ISMicrobiology spectrum · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 4 countries.

Roxana ZamudioQuadram Institute Bioscience, Norwich Research Park, Norwich, NR4 7UQ, UK.ORCID 0000-0003-3634-4828
Patrick BoerlinDepartment of Pathobiology, University of Guelph, Guelph, N1G 2W1, Canada.
Racha BeyrouthyMicrobes Intestin Inflammation et Susceptibilité de l'Hôte (M2ISH), Faculté de Médecine, Université Clermont Auvergne, Clermont-Ferrand, 63001, France.
Jean-Yves MadecUnité Antibiorésistance et Virulence Bactériennes, Anses Laboratoire de Lyon, Université de Lyon, Lyon, 69007, France.
Stefan SchwarzInstitute of Microbiology and Epizootics, Department of Veterinary Medicine, Freie Universität Berlin, Berlin, 14163, Germany.ORCID 0000-0002-6303-8212
Michael R MulveyNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, R3E 3R2, Canada.
George G ZhanelDepartment of Medical Microbiology and Infectious Diseases, Max Rady College of Medicine, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, R3E 0J9, Canada.
Ashley CormierDepartment of Pathobiology, University of Guelph, Guelph, N1G 2W1, Canada.
Gabhan ChalmersDepartment of Pathobiology, University of Guelph, Guelph, N1G 2W1, Canada.ORCID 0000-0002-6651-4253
Richard BonnetMicrobes Intestin Inflammation et Susceptibilité de l'Hôte (M2ISH), Faculté de Médecine, Université Clermont Auvergne, Clermont-Ferrand, 63001, France.
Marisa HaenniUnité Antibiorésistance et Virulence Bactériennes, Anses Laboratoire de Lyon, Université de Lyon, Lyon, 69007, France.
Inga EichhornInstitute of Microbiology and Epizootics, Department of Veterinary Medicine, Freie Universität Berlin, Berlin, 14163, Germany.
Heike KasparDepartment Method Standardisation, Resistance to Antibiotics Unit Monitoring of Resistance to Antibiotics, Federal Office of Consumer Protection and Food Safety, Berlin, 12277, Germany.
Raquel Garcia-FierroUnité Antibiorésistance et Virulence Bactériennes, Anses Laboratoire de Lyon, Université de Lyon, Lyon, 69007, France.
James L N WoodDepartment of Veterinary Medicine, University of Cambridge, Cambridge, CB3 0ES, UK.ORCID 0000-0002-0258-3188
Alison E MatherQuadram Institute Bioscience, Norwich Research Park, Norwich, NR4 7UQ, UK. alison.mather@quadram.ac.uk.ORCID 0000-0001-6513-3515
Université Claude Bernard Lyon 1 · FRUniversity of Guelph · CAFreie Universität Berlin · DEUniversité Clermont Auvergne · FRFederal Office of Consumer Protection and Food Safety · DENorwich Research Park · GBPublic Health Agency of Canada · CAUniversity of Cambridge · GBUniversity of East Anglia · GBUniversity of Manitoba · CA

Funding

Biotechnology and Biological Sciences Research Council BB/R012504/1Biotechnology and Biological Sciences Research Council BBS/E/F/000PR10348CIHR CFC-150770Medical Research Council MR/R000948/1Medical Research Council MR/T030062/1
6 · The paper itself

Abstract

Extended-spectrum cephalosporins (ESCs) are critically important antimicrobial agents for human and veterinary medicine. ESC resistance (ESC-R) genes have spread worldwide through plasmids and clonal expansion, yet the distribution and dynamics of ESC-R genes in different ecological compartments are poorly understood. Here we use whole genome sequence data of Enterobacterales isolates of human and animal origin from Europe and North America and identify contrasting temporal dynamics. AmpC β-lactamases were initially more dominant in North America in humans and farm animals, only later emerging in Europe. In contrast, specific extended-spectrum β-lactamases (ESBLs) were initially common in animals from Europe and later emerged in North America. This study identifies differences in the relative importance of plasmids and clonal expansion across different compartments for the spread of different ESC-R genes. Understanding the mechanisms of transmission will be critical in the design of interventions to reduce the spread of antimicrobial resistance.

Indexed as

Escherichia coliEscherichia coli InfectionsAnimalsAnti-Bacterial Agentsbeta-LactamasesCephalosporin ResistanceCephalosporinsHumansPlasmidsAnti-Bacterial Agentsbeta-LactamasesCephalosporins

Identifiers

PMID36509735
PMCPMC9744880
OpenAlexW4311156294

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.