Evidence map›Paper›PMID 36508568›Full record

ArticleAnalytical chemistry2022

Next-Generation Digital Polymerase Chain Reaction: High-Dynamic-Range Single-Molecule DNA Counting via Ultrapartitioning.

Eleen Y Shum, Janice H Lai, Sixing Li, Haeun G Lee, Jesse Soliman, Vedant K Raol, Cavina K Lee, Stephen P A Fodor, H Christina Fan

Open access · bronzeAbstract read
In one paragraph

Article in Analytical chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Eleen Y ShumEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.ORCID 0000-0002-1541-1609
Janice H LaiEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
Sixing LiEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
Haeun G LeeEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
Jesse SolimanEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
Vedant K RaolEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
Cavina K LeeEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
Stephen P A FodorEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.
H Christina FanEnumerix, Inc., 4030 Fabian Way, Palo Alto, California 94303, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Digital PCR (dPCR) was first conceived for single-molecule quantitation. However, current dPCR systems often require DNA templates to share partitions due to limited partitioning capacities. Here, we introduce UltraPCR, a next-generation dPCR system where DNA counting is performed in a single-molecule regimen through a 6-log dynamic range using a swift and parallelized workflow. Each UltraPCR reaction is divided into >30 million partitions without microfluidics to achieve single template occupancy. Combined with a unique emulsion chemistry, partitions are optically clear, enabling the use of a three-dimensional imaging technique to rapidly detect DNA-positive partitions. Single-molecule occupancy also allows for more straightforward multiplex assay development due to the absence of partition-specific competition. As a proof of concept, we developed a 222-plex UltraPCR assay and demonstrated its potential use as a rapid, low-cost screening assay for noninvasive prenatal testing for as low as 4% trisomy fraction samples with high precision, accuracy, and reproducibility.

Indexed as

DNANoninvasive Prenatal TestingDNA ReplicationFemaleHumansPolymerase Chain ReactionPregnancyReproducibility of ResultsDNA

Identifiers

PMID36508568
PMCPMC9798378
OpenAlexW4311285150

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.