Evidence map›Paper›PMID 36507964›Full record

ArticleUrolithiasis2022

Heterogeneity in stone culture protocols and endourologist practice patterns: a multi-institutional survey.

David T Tzou, Karen L Stern, Brian D Duty, Ryan S Hsi, Noah E Canvasser, Smita De, Ava C Wong, Charis R Royal, Meleighe L Sloss, Justin B Ziemba and 16 more

Abstract read
PubMed Publisher
In one paragraph

Article in Urolithiasis, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

David T TzouDepartment of Urology, University of Arizona College of Medicine, 1501 N. Campbell Ave, PO Box 245077, Tucson, AZ, 85724, USA. dtzou@urology.arizona.edu.ORCID http://orcid.org/0000-0002-9423-1656
Karen L SternDepartment of Urology, Mayo Clinic Arizona, 5777 E. Mayo Blvd, Phoenix, AZ, 85054, USA.
Brian D DutyDepartment of Urology, Oregon Health and Science University, 3303 SW Bond Ave, CH10U, Portland, OR, 97239, USA.
Ryan S HsiDepartment of Urology, Vanderbilt University Medical Center, A-1302 Medical Center North, Nashville, TN, 37232, USA.
Noah E CanvasserDepartment of Urology, University of California Davis, 4860 Y Street, Suite 3500, Sacramento, CA, 95817, USA.
Smita DeDepartment of Urology, Cleveland Clinic, 9500 Euclid Ave, Cleveland, OH, 44195, USA.
Ava C WongDepartment of Urology, University of Arizona College of Medicine, 1501 N. Campbell Ave, PO Box 245077, Tucson, AZ, 85724, USA.
Charis R RoyalDepartment of Urology, University of Arizona College of Medicine, 1501 N. Campbell Ave, PO Box 245077, Tucson, AZ, 85724, USA.
Meleighe L SlossDepartment of Urology, University of Arizona College of Medicine, 1501 N. Campbell Ave, PO Box 245077, Tucson, AZ, 85724, USA.
Justin B ZiembaDivision of Urology, University of Pennsylvania, 3PCAM West, 3400 Civic Center Blvd, Philadelphia, PA, 19104, USA.
Jonathan D HarperDepartment of Urology, University of Washington, 1959 NE Pacifica St, Seattle, WA, 98195, USA.
Seth K BechisDepartment of Urology, University of California San Diego, 200 W. Arbor Drive #8897, San Diego, CA, 92103, USA.
Anna M ZampiniDepartment of Urology, Cleveland Clinic, 9500 Euclid Ave, Cleveland, OH, 44195, USA.
Michael S BorofskyDepartment of Urology, University of Minnesota, 420 Delaware St SE, Box 394 Mayo, Minneapolis, MN, 55455, USA.
John Roger BellDepartment of Urology, University of Kentucky, MS 277 Medical Science Bldg., Lexington, KY, 40536, USA.
Justin I FriedlanderTemple Health/Fox Chase Cancer Center, 2705 Dekalb Pike, Medical Arts Pavilion, Suite 310, East Norriton, PA, 19041, USA.
David A LeavittVattikui Urology Institute, Henry Ford Hospital, 2799 W. Grand Blvd, Detroit, MI, 48202, USA.
Amihay NevoDepartment of Urology, Case Western Reserve University, 11100 Euclid Ave, Cleveland, OH, 44106, USA.
Nishant D PatelDepartment of Urology, University of Virginia, 500 Ray C. Hunt Drive, Charlottesville, VA, 22903, USA.
Roshan M PatelDepartment of Urology, University of California, Irvine. 333 City Blvd. West, Suite 2100, Orange, CA, 92868, USA.
Zeph OkekeDonald and Barbara Zucker School of Medicine at Hofstra/Northwell, 450 Lakeville Road, Suite M41, Lake Success, NY, 11042, USA.
Marcelino E RiveraIndiana University, Methodist Prof Bldg MPC1 220. 1801 N. Senate Blvd, Indianapolis, IN, 46202, USA.
Chiu-Hsieh HsuCollege of Public Health, University of Arizona, Roy P. Drachman Hall, Rm. A232, Tucson, AZ, 85721, USA.
Thomas ChiDepartment of Urology, University of California San Francisco, 400 Parnassus Ave, San Francisco, CA, 94122, USA.
Gayatri VedantamCollege of Animal Sciences, University of Arizona. Animal and Comparative Bio Sci, Rm 227, Tucson, AZ, 85721, USA.
William D LainhartDepartments of Pathology and Medicine, University of Arizona College of Medicine, 1501 N. Campbell Ave, Tucson, AZ, 85724, USA.

Funding

Health Sciences, University of Arizona UAHS-CDA
6 · The paper itself

Abstract

Kidney stone cultures can be beneficial in identifying bacteria not detected in urine, yet how stone cultures are performed among endourologists, under what conditions, and by what laboratory methods remain largely unknown. Stone cultures are not addressed by current clinical guidelines. A comprehensive REDCap electronic survey sought responses from directed (n = 20) and listserv elicited (n = 108) endourologists specializing in kidney stone disease. Questions included which clinical scenarios prompt a stone culture order, how results influence post-operative antibiotics, and what microbiology lab protocols exist at each institution with respect to processing and resulting stone cultures. Logistic regression statistical analysis determined what factors were associated with performing stone cultures. Of 128 unique responses, 11% identified as female and the mean years of practicing was 16 (range 1-46). A specific 'stone culture' order was available to only 50% (64/128) of those surveyed, while 32% (41/128) reported culturing stone by placing a urine culture order. The duration of antibiotics given for a positive stone culture varied, with 4-7 days (46%) and 8-14 days (21%) the most reported. More years in practice was associated with fewer stone cultures ordered, while higher annual volume of percutaneous nephrolithotomy was associated with ordering more stone cultures (p < 0.01). Endourologists have differing practice patterns with respect to ordering stone cultures and utilizing the results to guide post-operative antibiotics. With inconsistent microbiology lab stone culture protocols across multiple institutions, more uniform processing is needed for future studies to assess the clinical benefit of stone cultures and direct future guidelines.

Indexed as

Kidney CalculiNephrolithotomy, PercutaneousBacteriaFemaleHumansMulticenter Studies as TopicUrinalysisAntibioticsInfectionKidney stonesSepsisStone culture

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.