Evidence map›Paper›PMID 36507427›Full record

ArticleFrontiers in plant science2022

Comparative transcriptomic profiling of peach and nectarine cultivars reveals cultivar-specific responses to chilled postharvest storage.

Antonella Muto, Leonardo Bruno, Maria Letizia Madeo, Richard Ludlow, Michele Ferrari, Louise Stimpson, Claudio LoGiudice, Ernesto Picardi, Antonio Ferrante, Luisa Pasti and 5 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Antonella MutoDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Leonardo BrunoDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Maria Letizia MadeoDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Richard LudlowSchool of Biosciences, Cardiff University, Cardiff, United Kingdom.
Michele FerrariDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Louise StimpsonDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Claudio LoGiudiceDepartment of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, Bari, Italy.
Ernesto PicardiDepartment of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, Bari, Italy.
Antonio FerranteDepartment of Agricultural and Environmental Science, Università degli Studi di Milano, Milan, Italy.
Luisa PastiDepartment of Environment and Prevention Sciences, University of Ferrara, Ferrara, Italy.
Carsten T MüllerSchool of Biosciences, Cardiff University, Cardiff, United Kingdom.
Adriana Ada Ceverista ChiappettaDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Hilary J RogersSchool of Biosciences, Cardiff University, Cardiff, United Kingdom.
Maria Beatrice BitontiDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
Natasha Damiana SpadaforaDepartment of Biology, Ecology and Earth Sciences, University of Calabria, Cosenza, Italy.
University of Calabria · ITCardiff University · GBUniversity of Bari Aldo Moro · ITUniversity of Ferrara · ITUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Peach ( Methods: A comparative transcriptomic analysis was performed to identify regulatory pathways that develop before chilling injury symptoms are detectable using next generation sequencing on the fruits of two contrasting cultivars, one peach (Sagittaria) and one nectarine, (Big Top), over 14 days of postharvest cold storage. Results: There was a progressive increase in the number of differentially expressed genes between time points (DEGs) in both cultivars. More (1264) time point DEGs were identified in 'Big Top' compared to 'Sagittaria' (746 DEGs). Both cultivars showed a downregulation of pathways related to photosynthesis, and an upregulation of pathways related to amino sugars, nucleotide sugar metabolism and plant hormone signal transduction with ethylene pathways being most affected. Expression patterns of ethylene related genes (including biosynthesis, signaling and ERF transcription factors) correlated with genes involved in cell wall modification, membrane composition, pathogen and stress response, which are all involved later during storage in development of chilling injury. Discussion: Overall, the results show that common pathways are activated in the fruit of 'Big Top' nectarine and 'Sagittaria' peach in response to cold storage but include also differences that are cultivar-specific responses.

Indexed as

ERF transcription factorsethylenepostharvestPrunustranscriptome

Identifiers

PMID36507427
PMCPMC9733835
OpenAlexW4309933657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.