Evidence map›Paper›PMID 36507171›Full record

ArticleChemical science2022

Data-driven discovery of molecular photoswitches with multioutput Gaussian processes.

Ryan-Rhys Griffiths, Jake L Greenfield, Aditya R Thawani, Arian R Jamasb, Henry B Moss, Anthony Bourached, Penelope Jones, William McCorkindale, Alexander A Aldrick, Matthew J Fuchter and 1 more

Abstract read
In one paragraph

Article in Chemical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ryan-Rhys GriffithsThe Cavendish Laboratory, Department of Physics, University of Cambridge Cambridge CB3 0HE UK rrg27@cam.ac.uk aal44@cam.ac.uk.ORCID https://orcid.org/0000-0003-3117-4559
Jake L GreenfieldMolecular Sciences Research Hub, Department of Chemistry, Imperial College London London W12 0BZ UK.ORCID https://orcid.org/0000-0002-7650-5414
Aditya R ThawaniMolecular Sciences Research Hub, Department of Chemistry, Imperial College London London W12 0BZ UK.ORCID https://orcid.org/0000-0003-0388-9055
Arian R JamasbThe Computer Laboratory, University of Cambridge Cambridge CB3 0FD UK.ORCID https://orcid.org/0000-0002-6727-7579
Henry B MossSecondmind.ai Cambridge CB2 1LA UK.
Anthony BourachedThe Institute of Neurology, Department of Neurology, University College London London WC1N 3BG UK.
Penelope JonesThe Cavendish Laboratory, Department of Physics, University of Cambridge Cambridge CB3 0HE UK rrg27@cam.ac.uk aal44@cam.ac.uk.
William McCorkindaleThe Cavendish Laboratory, Department of Physics, University of Cambridge Cambridge CB3 0HE UK rrg27@cam.ac.uk aal44@cam.ac.uk.ORCID https://orcid.org/0000-0001-6052-8833
Alexander A AldrickThe Cavendish Laboratory, Department of Physics, University of Cambridge Cambridge CB3 0HE UK rrg27@cam.ac.uk aal44@cam.ac.uk.
Matthew J FuchterMolecular Sciences Research Hub, Department of Chemistry, Imperial College London London W12 0BZ UK.ORCID https://orcid.org/0000-0002-1767-7072
Alpha A LeeThe Cavendish Laboratory, Department of Physics, University of Cambridge Cambridge CB3 0HE UK rrg27@cam.ac.uk aal44@cam.ac.uk.ORCID https://orcid.org/0000-0002-9616-3108

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photoswitchable molecules display two or more isomeric forms that may be accessed using light. Separating the electronic absorption bands of these isomers is key to selectively addressing a specific isomer and achieving high photostationary states whilst overall red-shifting the absorption bands serves to limit material damage due to UV-exposure and increases penetration depth in photopharmacological applications. Engineering these properties into a system through synthetic design however, remains a challenge. Here, we present a data-driven discovery pipeline for molecular photoswitches underpinned by dataset curation and multitask learning with Gaussian processes. In the prediction of electronic transition wavelengths, we demonstrate that a multioutput Gaussian process (MOGP) trained using labels from four photoswitch transition wavelengths yields the strongest predictive performance relative to single-task models as well as operationally outperforming time-dependent density functional theory (TD-DFT) in terms of the wall-clock time for prediction. We validate our proposed approach experimentally by screening a library of commercially available photoswitchable molecules. Through this screen, we identified several motifs that displayed separated electronic absorption bands of their isomers, exhibited red-shifted absorptions, and are suited for information transfer and photopharmacological applications. Our curated dataset, code, as well as all models are made available at https://github.com/Ryan-Rhys/The-Photoswitch-Dataset.

Identifiers

PMID36507171
PMCPMC9682911

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.