Evidence map›Paper›PMID 36505822›Full record

ArticleFrontiers in oncology2022

Pan-cancer analysis reveals DDX21 as a potential biomarker for the prognosis of multiple tumor types.

Ankang Hu, Yonghui Wang, Jiahao Tian, Zihan Chen, Renjin Chen, Xufeng Han, Yang Chen, Tingjun Liu, Quangang Chen

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ankang HuLaboratory Animal Center, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Yonghui WangSchool of Life Science, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Jiahao TianClinical Medicine Science, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, Jiangsu, China.
Zihan ChenCancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Renjin ChenSchool of Life Science, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Xufeng HanSchool of Life Science, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Yang ChenSchool of Life Science, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Tingjun LiuLaboratory Animal Center, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Quangang ChenSchool of Life Science, Xuzhou Medical University, Xuzhou, Jiangsu, China.
Xuzhou Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: DExD-box helicase 21 (DDX21) is an essential member of the RNA helicase family. DDX21 is involved in the carcinogenesis of various malignancies, but there has been no comprehensive research on its involvement in different types of cancer. Method: This study used TCGA, CPTAC, GTEx, GEO, FANTOM5, BioGRID, TIMER2, GEPIA2, cBioPortal, STRING, and Metascape databases and Survival ROC software to evaluate DDX21 gene expression, protein expression, immunohistochemistry, gene mutation, immune infiltration, and protein phosphorylation in 33 TCGA tumor types, as well as the prognostic relationship between DDX21 and different tumors, by survival analysis and similar gene enrichment analysis. Furthermore, Cell Counting Kit-8 (CCK-8) and Transwell studies were employed to assess the effect of DDX21 expression on lung adenocarcinoma (LUAD) cell proliferation and migration. Result: The DDX21 gene was highly expressed in most cancers, and overexpression was associated with poor overall survival (OS) and disease-free survival (DFS). DDX21 mutations were most common in uterine corpus endometrial carcinoma (UCEC; >5%), and DDX21 expression was positively correlated with the degree of infiltration of CAF and CD8 Conclusions: DDX21 is overexpressed in a variety of cancers, and overexpression in some cancers is associated with poor prognosis. Immune infiltration and DDX21-related gene enrichment analyses indicated that DDX21 may affect cancer development through mechanisms that regulate tumor immunity, RNA metabolism, and ribosomal protein synthesis. This pan-cancer study revealed the prognostic value and the oncogenic role of DDX21.

Indexed as

biomarkerDDX21immune infiltrationpan-cancerprognosis

Identifiers

PMID36505822
PMCPMC9730287
OpenAlexW4309852294

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.