Evidence map›Paper›PMID 36505798›Full record

ArticleFrontiers in oncology2022

Prognostic value and immune infiltration of the gasdermin family in lung adenocarcinoma.

Lu-Shan Peng, Sai-Li Duan, Run-Qi Li, Dan Wang, Ying-Ying Han, Tao Huang, Yu-Pei Yu, Chun-Lin Ou, Jun-Pu Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Role of gasdermin family proteins in cancers (Review).International journal of oncology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lu-Shan PengDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Sai-Li DuanDepartment of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Run-Qi LiDepartment of Pathology, School of Basic Medicine, Central South University, Changsha, Hunan, China.
Dan WangDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Ying-Ying HanDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Tao HuangDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Yu-Pei YuDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Chun-Lin OuDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Jun-Pu WangDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Central South University · CNXiangya Hospital Central South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The GSDM family includes six members, GSDMA, GSDMB, GSDMC, GSDMD, GSDME (DFNA5), and PJVK (Pejvakin, DFNB59), which can induce pyroptosis, thereby regulating the tumorigenesis of various cancers. However, the clinical characteristics and role of the GSDM family in LUAD are not well understood. Methods: In this study, several important bioinformatics databases were used to integrate the analysis of the expression, prognostic value, and immune infiltration of GSDMs in LUAD. These databases include UALCAN, DiseaseMeth, GEPIA, THPA, cBioPortal, TIMER, WebGestalt, STRING database, and Cytoscape. Results: The findings from the UALCAN database revealed that the expression of all six GSDMs based on the tumor stage in LUAD was increased (particularly GSDMD). Our IHC results verified it. Additionally, the DiseaseMeth database showed that the methylation levels of GSDMA, GSDMB, GSDMC, and GSDMD were decreased. The expression of six GSDMs was related to shorter overall survival in patients with LUAD, according to the GEPIA database. The cBioPortal database was further used to explore the alteration rate and correlated genes in LUAD. Subsequently, these genes were subjected to functional enrichment and protein-protein interaction network analyses. We identified that the GSDM family regulate several signaling pathways, including immune-associated signaling pathways. According to tumor-infiltrating immune cell analysis from the TIMER database, GSDM family members are associated with the infiltration of important immune cells and their signature markers. Conclusions: GSDM family may be prognostic markers and novel strategies for the treatment of LUAD.

Indexed as

biomarkerGSDM familyimmune infiltrationlung adenocarcinomamethylationprognosis

Identifiers

PMID36505798
PMCPMC9732578
OpenAlexW4310036793

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.