Evidence map›Paper›PMID 36505475›Full record

ReviewFrontiers in immunology2022

SARS-CoV-2 epitopes inform future vaccination strategies.

Areez Shafqat, Mohamed H Omer, Omar Ahmad, Mahnoor Niaz, Humzah S Abdulkader, Shameel Shafqat, Ali Hassan Mushtaq, Abdullah Shaik, Ahmed N Elshaer, Junaid Kashir and 2 more

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Neutrophil extracellular traps and long COVID.Frontiers in immunology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Areez ShafqatCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Mohamed H OmerSchool of Medicine, Cardiff University, Cardiff, United Kingdom.
Omar AhmadCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Mahnoor NiazMedical College, Aga Khan University, Karachi, Pakistan.
Humzah S AbdulkaderCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Shameel ShafqatMedical College, Aga Khan University, Karachi, Pakistan.
Ali Hassan MushtaqCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Abdullah ShaikCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Ahmed N ElshaerCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Junaid KashirCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Khaled AlkattanCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Ahmed YaqinuddinCollege of Medicine, Alfaisal University, Riyadh, Saudi Arabia.
Alfaisal University · SAAga Khan University · PKCardiff University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

All currently approved COVID-19 vaccines utilize the spike protein as their immunogen. SARS-CoV-2 variants of concern (VOCs) contain mutations in the spike protein, enabling them to escape infection- and vaccination-induced immune responses to cause reinfection. New vaccines are hence being researched intensively. Studying SARS-CoV-2 epitopes is essential for vaccine design, as identifying targets of broadly neutralizing antibody responses and immunodominant T-cell epitopes reveal candidates for inclusion in next-generation COVID-19 vaccines. We summarize the major studies which have reported on SARS-CoV-2 antibody and T-cell epitopes thus far. These results suggest that a future of pan-coronavirus vaccines, which not only protect against SARS-CoV-2 but numerous other coronaviruses, may be possible. The T-cell epitopes of SARS-CoV-2 have gotten less attention than neutralizing antibody epitopes but may provide new strategies to control SARS-CoV-2 infection. T-cells target many SARS-CoV-2 antigens other than spike, recognizing numerous epitopes within these antigens, thereby limiting the chance of immune escape by VOCs that mainly possess spike protein mutations. Therefore, augmenting vaccination-induced T-cell responses against SARS-CoV-2 may provide adequate protection despite broad antibody escape by VOCs.

Indexed as

COVID-19SARS-CoV-2Antibodies, ViralCOVID-19 VaccinesEpitopes, T-LymphocyteHumansSpike Glycoprotein, CoronavirusAntibodies, ViralCOVID-19 VaccinesEpitopes, T-LymphocyteSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2broadly neutralizing antibodiesCOVID-19epitopesomicronT-cells

Identifiers

PMID36505475
PMCPMC9732895
OpenAlexW4310037443

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.