Evidence map›Paper›PMID 36505306›Full record

ArticleAmerican journal of translational research2022

Prediction and screening of circRNA in triple-negative breast cancer.

Xuanhe Li, Song Zhang, Siyu Sun, Xicheng Yue, Liyu Qian, Jie Tang, Fangqian Jiang, Jianfei Lu, Yifan Cao, Shengwen Meng and 1 more

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Xuanhe LiOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Song ZhangOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Siyu SunOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Xicheng YueOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Liyu QianOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Jie TangOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Fangqian JiangOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Jianfei LuOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Yifan CaoOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Shengwen MengOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
Tingjing YaoOncology Surgery, The First Affiliated Hospital of Bengbu Medical College 287 Changhuai Road, Bengbu 233000, Anhui, China.
First Affiliated Hospital of Bengbu Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe purpose of this investigation was to study the expression profile and potential function of circular RNA (circRNA) and long noncoding RNA (lncRNA) in triple-negative breast cancer (TNBC).

methodsRNA sequencing technology was used to detect differentially expressed circRNAs and lncRNAs between TNBC tissues and the adjacent tissue. The potential functions of these different RNAs were analyzed by GO and KEGG enrichment analysis by bioinformatics tools. We also selected and analyzed these key circRNAs and lncRNAs to verify their important functions in TNBC.

resultsA total of 139 differentially expressed circRNAs and 1001 lncRNAs were obtained. The co-expression analysis showed that the hub lncRNAs (OIP5-AS1, DRAIC) were associated with several tumors and mainly enriched in tumor metastasis. We also screened 5 circRNA-hosting genes (NTRK2, FNTA, BAPGEF2, MGST2, ADH1B) that were associated with the brain-derived neurotrophic factor (BDNF) receptor signaling pathway and cerebral cortex development, as well as AMPK and TGF-β signaling pathway.

conclusionWe identified a large number of differentially expressed circRNAs and lncRNAs, which provide useful insight in understanding TNBC carcinogenesis.

Indexed as

circRNAenrichment analysislncRNATNBC

Identifiers

PMID36505306
PMCPMC9730078
OpenAlexW4311287755

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.