Evidence map›Paper›PMID 36503186›Full record

ArticleThe plant pathology journal2022

New Sources of Resistance and Identification of DNA Marker Loci for Sheath Blight Disease Caused by Rhizoctonia solani Kuhn, in Rice.

Pachai Poonguzhali, Ashish Chauhan, Abinash Kar, Shivaji Lavale, Spurthi N Nayak, S K Prashanthi

Open access · goldAbstract read
In one paragraph

Article in The plant pathology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

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3 · Its place in the literature

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2 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Pachai PoonguzhaliDepartment of Biotechnology, University of Agricultural Sciences, Dharwad 580005, Karnataka, India.
Ashish ChauhanDepartment of Biotechnology, University of Agricultural Sciences, Dharwad 580005, Karnataka, India.
Abinash KarDepartment of Biotechnology, University of Agricultural Sciences, Dharwad 580005, Karnataka, India.
Shivaji LavaleDepartment of Biotechnology, University of Agricultural Sciences, Dharwad 580005, Karnataka, India.
Spurthi N NayakDepartment of Biotechnology, University of Agricultural Sciences, Dharwad 580005, Karnataka, India.
S K PrashanthiDepartment of Biotechnology, University of Agricultural Sciences, Dharwad 580005, Karnataka, India.
University of Agricultural Sciences, Dharwad · IN

Funding

Department of Biotechnology , Ministry of Science and Technology
6 · The paper itself

Abstract

Sheath blight disease caused by the necrotrophic, soilborne pathogen Rhizoctonia solani Kuhn, is the global threat to rice production. Lack of reliable stable resistance sources in rice germplasm pool for sheath blight has made resistance breeding a very difficult task. In the current study, 101 rice landraces were screened against R. solani under artificial epiphytotics and identified six moderately resistant landraces, Jigguvaratiga, Honasu, Jeer Sali, Jeeraga-2, BiliKagga, and Medini Sannabatta with relative lesion height (RLH) range of 21-30%. Landrace Jigguvaratiga with consistent and better level of resistance (21% RLH) than resistant check Tetep (RLH 28%) was used to develop mapping population. DNA markers associated with ShB resistance were identified in F2 mapping population developed from Jigguvaratiga × BPT5204 (susceptible variety) using bulk segregant analysis. Among 56 parental polymorphic markers, RM5556, RM6208, and RM7 were polymorphic between the bulks. Single marker analysis indicated the significant association of ShB with RM5556 and RM6208 with phenotypic variance (R2) of 28.29 and 20.06%, respectively. Co-segregation analysis confirmed the strong association of RM5556 and RM6208 located on chromosome 8 for ShB trait. This is the first report on association of RM6208 marker for ShB resistance. In silico analysis revealed that RM6208 loci resides the stearoyl ACP desaturases protein, which is involved in defense mechanism against plant pathogens. RM5556 loci resides a protein, with unknown function. The putative candidate genes or quantitative trait locus harbouring at the marker interval of RM5556 and RM6208 can be further used to develop ShB resistant varieties using molecular breeding approaches.

Indexed as

bulk segregant analysisDNA markersresistancericesheath blight

Identifiers

PMID36503186
PMCPMC9742804
OpenAlexW4311097300

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.