Evidence map›Paper›PMID 36502525›Full record

ArticleGenes, chromosomes & cancer2023

AXIN2 germline testing in a French cohort validates pathogenic variants as a rare cause of predisposition to colorectal polyposis and cancer.

Julie Leclerc, Marie Beaumont, Roseline Vibert, Stéphane Pinson, Catherine Vermaut, Cathy Flament, Tonio Lovecchio, Lucie Delattre, Christophe Demay, Florence Coulet and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in Genes, chromosomes & cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 4 pooled it
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 4 syntheses or guidelines pooled it, 13 citations in OpenAlex.

  1. Pooled it
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  3. Pooled it
  4. Guideline
  5. Review
  6. Review
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 12 institutions in 3 countries.

Julie LeclercUniv. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277 CANTHER - Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France.ORCID 0000-0003-1130-7211
Marie BeaumontLaboratoire de Génétique Moléculaire et Génomique, CHU Rennes, Rennes, France.ORCID 0000-0002-5113-4303
Roseline VibertUF d'Oncogénétique Clinique, Département de Génétique et Institut Universitaire de Cancérologie, Hôpitaux Pitié-Salpêtrière et Saint-Antoine, AP-HP. Sorbonne Université, Paris, France.ORCID 0000-0001-5202-0212
Stéphane PinsonHuman Genetics Department, Hospices Civils de Lyon, Lyon, France.ORCID 0000-0002-6804-4021
Catherine VermautMolecular Oncogenetics, Department of Biochemistry and Molecular Biology, Lille University Hospital, Lille, France.ORCID 0000-0002-3956-5864
Cathy FlamentMolecular Oncogenetics, Department of Biochemistry and Molecular Biology, Lille University Hospital, Lille, France.
Tonio LovecchioMolecular Oncogenetics, Department of Biochemistry and Molecular Biology, Lille University Hospital, Lille, France.
Lucie DelattreMolecular Oncogenetics, Department of Biochemistry and Molecular Biology, Lille University Hospital, Lille, France.
Christophe DemayBioinformatics Unit, Molecular Biology Facility, Lille University Hospital, Lille, France.
Florence CouletSorbonne University, INSERM, Saint-Antoine Research Center, Microsatellites instability and Cancer, CRSA, Genetics Department, AP-HP, Hôpital Pitié Salpêtrière, Sorbonne University, Paris, France.ORCID 0000-0002-5325-5272
Erell GuillermSorbonne University, INSERM, Saint-Antoine Research Center, Microsatellites instability and Cancer, CRSA, Genetics Department, AP-HP, Hôpital Pitié Salpêtrière, Sorbonne University, Paris, France.
Nadim HamzaouiService de Génétique et Biologie Moléculaires, Hôpital Cochin, AP-HP Centre, Université de Paris, and INSERM UMR_S1016, Institut Cochin, Université de Paris, Paris, France.ORCID 0000-0003-4630-9401
Patrick R BenusiglioUF d'Oncogénétique Clinique, Département de Génétique et Institut Universitaire de Cancérologie, Hôpitaux Pitié-Salpêtrière et Saint-Antoine, AP-HP. Sorbonne Université, Paris, France.ORCID 0000-0003-1003-1997
Afane BrahimiClinique de Génétique, CHU Lille, Lille, France.
François CornelisDepartment of Genetics-Oncogénétics-Prevention, Clermont-Ferrand Hospital, Clermont-Auvergne University, Clermont Ferrand, France.
Hélène DelhomelleDepartment of Genetics, Curie Institute, Paris Sciences & Lettres Research University, Paris, France.
Sandra Fert-FerrerCentre Hospitalier Métropole Savoie, Chambéry, France.
Benjamin P J FournierCentre de Recherche des Cordeliers, University of Paris, Sorbonne University, INSERM UMRS 1138 - Molecular Oral Pathophysiology, Paris, France.ORCID 0000-0003-4383-7524
Alain HovnanianINSERM UMR 1163 - Laboratory of Genetic Skin Diseases, Imagine Institute, Paris, France.ORCID 0000-0003-3412-7512
Clémentine LegrandService de Génétique, Génomique et Procréation, CHU Grenoble Alpes, Grenoble, France.ORCID 0000-0002-0164-6335
Alain LortholaryCentre Catherine de Sienne, hôpital privé du Confluent, Nantes, France.ORCID 0000-0002-2585-6193
David MalkaDepartment of Cancer Medicine, Gustave Roussy, Paris-Saclay University, INSERM UMR 1279 - Unité Dynamique des Cellules Tumorales, Villejuif, France.ORCID 0000-0002-7664-0130
Florence PetitClinique de Génétique, CHU Lille, Lille, France.ORCID 0000-0002-1368-1023
Jean-Christophe SaurinHepatogastroenterology, E Herriot Hospital, Hospices Civils de Lyon, Lyon, France.ORCID 0000-0002-2694-2325
Sophie LejeuneClinique de Génétique, CHU Lille, Lille, France.ORCID 0000-0003-0650-3269
Chrystelle ColasDepartment of Genetics, Curie Institute, Paris Sciences & Lettres Research University, Paris, France.ORCID 0000-0001-9146-9346
Marie-Pierre BuisineUniv. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277 CANTHER - Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France.ORCID 0000-0002-3255-5380
Inserm · FRUniversité de Lille · FRCentre Hospitalier Universitaire de Lille · FRCentre National de la Recherche Scientifique · FRHospices Civils de Lyon · FRSorbonne Université · FRUniversité Paris Sciences et Lettres · FRCentre Hospitalier Métropole Savoie · FRCentre Hospitalier Universitaire de Grenoble · FRHôpital privé du Confluent · FRLaboratoire de Génétique Cellulaire · FRUniversité Clermont Auvergne · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Only a few patients with germline AXIN2 variants and colorectal adenomatous polyposis or cancer have been described, raising questions about the actual contribution of this gene to colorectal cancer (CRC) susceptibility. To assess the clinical relevance for AXIN2 testing in patients suspected of genetic predisposition to CRC, we collected clinical and molecular data from the French Oncogenetics laboratories analyzing AXIN2 in this context. Between 2004 and June 2020, 10 different pathogenic/likely pathogenic AXIN2 variants were identified in 11 unrelated individuals. Eight variants were from a consecutive series of 3322 patients, which represents a frequency of 0.24%. However, loss-of-function AXIN2 variants were strongly associated with genetic predisposition to CRC as compared with controls (odds ratio: 11.89, 95% confidence interval: 5.103-28.93). Most of the variants were predicted to produce an AXIN2 protein devoid of the SMAD3-binding and DIX domains, but preserving the β-catenin-binding domain. Ninety-one percent of the AXIN2 variant carriers who underwent colonoscopy had adenomatous polyposis. Forty percent of the variant carriers developed colorectal or/and other digestive cancer. Multiple tooth agenesis was present in at least 60% of them. Our report provides further evidence for a role of AXIN2 in CRC susceptibility, arguing for AXIN2 testing in patients with colorectal adenomatous polyposis or cancer.

Indexed as

Adenomatous Polyposis ColiColorectal NeoplasmsAxin Proteinbeta CateninGenetic Predisposition to DiseaseGerm CellsGerm-Line MutationHumansAXIN2 protein, humanAxin Proteinbeta Cateninadenomatous polyposiscolorectal cancer susceptibilityoligodontiaWnt signaling pathway

Identifiers

PMID36502525
PMCPMC10107344
OpenAlexW4312065269

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.