Evidence map›Paper›PMID 36499647›Full record

ArticleInternational journal of molecular sciences2022

Genome-Wide Association Analysis for Hybrid Breeding in Wheat.

Monika Mokrzycka, Stefan Stojałowski, Mirosław Tyrka, Przemysław Matysik, Barbara Żmijewska, Rafał Marcinkowski, Urszula Woźna-Pawlak, Róża Martofel, Michał Rokicki, Monika Rakoczy-Trojanowska and 1 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Molecular Genetics Enhances Plant Breeding.International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Monika MokrzyckaInstitute of Plant Genetics, Polish Academy of Science, Strzeszyńska 34, 60-479 Poznań, Poland.ORCID 0000-0002-4512-845X
Stefan StojałowskiDepartment of Plant Genetics, Breeding and Biotechnology, West Pomeranian University of Technology Szczecin, Słowackiego 17, 71-434 Szczecin, Poland.ORCID 0000-0002-2666-9090
Mirosław TyrkaDepartment of Biotechnology and Bioinformatics, Faculty of Chemistry, Rzeszow University of Technology, Powstańców Warszawy 6, 35-959 Rzeszów, Poland.ORCID 0000-0002-6051-5079
Przemysław MatysikPlant Breeding Strzelce Group IHAR Ltd., Główna 20, 99-307 Strzelce, Poland.
Barbara ŻmijewskaPlant Breeding Strzelce Group IHAR Ltd., Główna 20, 99-307 Strzelce, Poland.
Rafał MarcinkowskiPlant Breeding Strzelce Group IHAR Ltd., Główna 20, 99-307 Strzelce, Poland.
Urszula Woźna-PawlakPoznań Plant Breeding Ltd., Kasztanowa 5, 63-004 Tulce, Poland.
Róża MartofelPoznań Plant Breeding Ltd., Kasztanowa 5, 63-004 Tulce, Poland.
Michał RokickiPoznań Plant Breeding Ltd., Kasztanowa 5, 63-004 Tulce, Poland.
Monika Rakoczy-TrojanowskaDepartment of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warszawa, Poland.
Paweł KrajewskiInstitute of Plant Genetics, Polish Academy of Science, Strzeszyńska 34, 60-479 Poznań, Poland.

Funding

National Centre for Research and Development BIOSTRATEG3/343665/6/NCBR/2017
6 · The paper itself

Abstract

Disclosure of markers that are significantly associated with plant traits can help develop new varieties with desirable properties. This study determined the genome-wide associations based on DArTseq markers for six agronomic traits assessed in eight environments for wheat. Moreover, the association study for heterosis and analysis of the effects of markers grouped by linkage disequilibrium were performed based on mean values over all experiments. All results were validated using data from post-registration trials. GWAS revealed 1273 single nucleotide polymorphisms with biologically significant effects. Most polymorphisms were predicted to be modifiers of protein translation, with only two having a more pronounced effect. Markers significantly associated with the considered set of features were clustered within chromosomes based on linkage disequilibrium in 327 LD blocks. A GWAS for heterosis revealed 1261 markers with significant effects.

Indexed as

Genome-Wide Association StudyTriticumGenome, PlantGenotypeLinkage DisequilibriumPhenotypePlant BreedingPolymorphism, Single Nucleotidegenome-wide association studywheat hybrid breeding

Identifiers

PMID36499647
PMCPMC9740285

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.