Evidence map›Paper›PMID 36497057›Full record

ArticleCells2022

Long-Term Characteristics of Human-Derived Biliary Organoids under a Single Continuous Culture Condition.

Ranan G Aktas, Michael Karski, Biju Issac, Liang Sun, Shira Rockowitz, Piotr Sliz, Khashayar Vakili

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Ranan G AktasDepartment of Surgery, Boston Children's Hospital, Boston, MA 02472, USA.ORCID 0000-0002-4474-7371
Michael KarskiDepartment of Surgery, Boston Children's Hospital, Boston, MA 02472, USA.
Biju IssacResearch Computing, Information Technology, Boston Children's Hospital, Boston, MA 02472, USA.
Liang SunResearch Computing, Information Technology, Boston Children's Hospital, Boston, MA 02472, USA.ORCID 0000-0002-0321-9222
Shira RockowitzResearch Computing, Information Technology, Boston Children's Hospital, Boston, MA 02472, USA.
Piotr SlizResearch Computing, Information Technology, Boston Children's Hospital, Boston, MA 02472, USA.
Khashayar VakiliDepartment of Surgery, Boston Children's Hospital, Boston, MA 02472, USA.
Boston Children's Hospital · US

Funding

CHMC Surgical Foundation N/A
6 · The paper itself

Abstract

Organoids have been used to investigate the three-dimensional (3D) organization and function of their respective organs. These self-organizing 3D structures offer a distinct advantage over traditional two-dimensional (2D) culture techniques by creating a more physiologically relevant milieu to study complex biological systems. The goal of this study was to determine the feasibility of establishing organoids from various pediatric liver diseases and characterize the long-term evolution of cholangiocyte organoids (chol-orgs) under a single continuous culture condition. We established chol-orgs from 10 different liver conditions and characterized their multicellular organization into complex epithelial structures through budding, merging, and lumen formation. Immunofluorescent staining, electron microscopy, and single-nucleus RNA (snRNA-seq) sequencing confirmed the cholangiocytic nature of the chol-orgs. There were significant cell population differences in the transcript profiles of two-dimensional and organoid cultures based on snRNA-seq. Our study provides an approach for the generation and long-term maintenance of chol-orgs from various pediatric liver diseases under a single continuous culture condition.

Indexed as

Epithelial CellsOrganoidsChildHumans3Dbiliary systemextracellular matrixmicroenvironmentorganoidprimary cellsthree dimensional

Identifiers

PMID36497057
PMCPMC9741396
OpenAlexW4310213296

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.