Evidence map›Paper›PMID 36494342›Full record

ArticleNature communications2022

The transcription factor DDIT3 is a potential driver of dyserythropoiesis in myelodysplastic syndromes.

Nerea Berastegui, Marina Ainciburu, Juan P Romero, Paula Garcia-Olloqui, Ana Alfonso-Pierola, Céline Philippe, Amaia Vilas-Zornoza, Patxi San Martin-Uriz, Raquel Ruiz-Hernández, Ander Abarrategi and 26 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genetic Variants of the Human Thiamine Transporter (International journal of molecular sciences · 2025
    Article
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  9. Iron-Loading Anemias.Advances in experimental medicine and biology · 2025
    Review
  10. Frontiers in endocrinology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 9 institutions in 3 countries.

Nerea Berastegui *Department of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.ORCID http://orcid.org/0000-0002-9868-0547
Marina Ainciburu *Department of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.ORCID http://orcid.org/0000-0001-6483-1901
Juan P RomeroDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.
Paula Garcia-OlloquiDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.ORCID http://orcid.org/0000-0002-7983-2875
Ana Alfonso-PierolaCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Instituto de Salud Carlos III, Madrid, Spain.
Céline PhilippeDepartment of Haemato-Oncology, Barts Cancer Institute, Queen Mary University of London, London, England, UK.ORCID http://orcid.org/0000-0002-8546-3893
Amaia Vilas-ZornozaDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.
Patxi San Martin-UrizDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.ORCID http://orcid.org/0000-0003-1483-4279
Raquel Ruiz-HernándezCenter for Cooperative Research in Biomaterials (CIC biomaGUNE), Basque Research and Technology Alliance (BRTA), San Sebastian, Spain.ORCID http://orcid.org/0000-0001-6166-380X
Ander AbarrategiCenter for Cooperative Research in Biomaterials (CIC biomaGUNE), Basque Research and Technology Alliance (BRTA), San Sebastian, Spain.
Raquel OrdoñezInstitute for Systems Genetics, NYU School of Medicine, New York, NY, USA.
Diego AlignaniDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.
Sarai SarvideDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.
Laura Castro-LabradorDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.ORCID http://orcid.org/0000-0003-4733-5468
José M Lamo-EspinosaDepartment of Orthopedic Surgery and Traumatology, Clínica Universidad de Navarra, Universidad de Navarra and CCUN, 31008, Pamplona, Spain.
Mikel San-JulianDepartment of Orthopedic Surgery and Traumatology, Clínica Universidad de Navarra, Universidad de Navarra and CCUN, 31008, Pamplona, Spain.ORCID http://orcid.org/0000-0001-5502-506X
Tamara JimenezDepartment of Hematology, Hospital Universitario de Salamanca-IBSAL, Universidad de Salamanca, Salamanca, Spain.ORCID http://orcid.org/0000-0001-5894-2023
Félix López-CadenasDepartment of Hematology, Hospital Universitario de Salamanca-IBSAL, Universidad de Salamanca, Salamanca, Spain.
Sandra MuntionDepartment of Hematology, Hospital Universitario de Salamanca-IBSAL, Universidad de Salamanca, Salamanca, Spain.
Fermin Sanchez-GuijoCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Instituto de Salud Carlos III, Madrid, Spain.ORCID http://orcid.org/0000-0002-7076-7739
Antonieta MoleroDepartment of Hematology, Experimental Hematology, Vall d'Hebron Institute of Oncology (VHIO), Hospital Universitari Vall d'Hebron, Barcelona, Spain.ORCID http://orcid.org/0000-0002-3735-465X
Maria Julia MontoroDepartment of Hematology, Experimental Hematology, Vall d'Hebron Institute of Oncology (VHIO), Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Bárbara TazónDepartment of Hematology, Experimental Hematology, Vall d'Hebron Institute of Oncology (VHIO), Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Guillermo SerranoComputational Biology Program, Institute for data science and artificial intelligence (datai), CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Navarra, Spain.ORCID http://orcid.org/0000-0003-3972-6186
Aintzane Diaz-MazkiaranDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.
Mikel HernaezCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Instituto de Salud Carlos III, Madrid, Spain.ORCID http://orcid.org/0000-0003-0443-2305
Sofía HuergaDepartment of Hematology, Clínica Universidad de Navarra, Universidad de Navarra and CCUN, 31008, Pamplona, Spain.
Findlay Bewicke-CopleyCentre for Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0003-1292-7965
Ana Rio-MachinCentre for Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0001-6733-9752
Matthew T MauranoInstitute for Systems Genetics, NYU School of Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-2218-8628
María Díez-CampeloCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Instituto de Salud Carlos III, Madrid, Spain.ORCID http://orcid.org/0000-0002-1467-6779
David ValcarcelDepartment of Hematology, Experimental Hematology, Vall d'Hebron Institute of Oncology (VHIO), Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Kevin Rouault-PierreDepartment of Haemato-Oncology, Barts Cancer Institute, Queen Mary University of London, London, England, UK.ORCID http://orcid.org/0000-0001-7671-7364
David Lara-AstiasoDepartment of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.ORCID http://orcid.org/0000-0001-8686-4675
Teresa Ezponda *Department of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain. tezponda@unav.es.ORCID http://orcid.org/0000-0003-3682-7125
Felipe Prosper *Department of Hematology-Oncology, CIMA Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain. fprosper@unav.es.ORCID http://orcid.org/0000-0001-6115-8790
Instituto de Salud Carlos III · ESNavarre Institute of Health Research · ESUniversidad de Salamanca · ESQueen Mary University of London · GBVall d'Hebron Hospital Universitari · ESClinica Universidad de Navarra · ESInstitute for Systems Biology · USCIC biomaGUNE · ESIkerbasque · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myelodysplastic syndromes (MDS) are hematopoietic stem cell (HSC) malignancies characterized by ineffective hematopoiesis, with increased incidence in older individuals. Here we analyze the transcriptome of human HSCs purified from young and older healthy adults, as well as MDS patients, identifying transcriptional alterations following different patterns of expression. While aging-associated lesions seem to predispose HSCs to myeloid transformation, disease-specific alterations may trigger MDS development. Among MDS-specific lesions, we detect the upregulation of the transcription factor DNA Damage Inducible Transcript 3 (DDIT3). Overexpression of DDIT3 in human healthy HSCs induces an MDS-like transcriptional state, and dyserythropoiesis, an effect associated with a failure in the activation of transcriptional programs required for normal erythroid differentiation. Moreover, DDIT3 knockdown in CD34

Indexed as

Myelodysplastic SyndromesTranscription FactorsAdultAgedErythropoiesisGene Expression RegulationHematopoietic Stem CellsHumansTranscription Factor CHOPDDIT3 protein, humanTranscription Factor CHOPTranscription Factors

Identifiers

PMID36494342
PMCPMC9734135
OpenAlexW4311665091

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.