Evidence map›Paper›PMID 36494195›Full record

ArticlePlant physiology2023

The double flower variant of yellowhorn is due to a LINE1 transposon-mediated insertion.

Hanhui Wang, Yanan Lu, Tianxu Zhang, Zhi Liu, Li Cao, Qiaoying Chang, Yueying Liu, Xin Lu, Song Yu, Huiyu Li and 6 more

Erratum issuedAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. The gene-like promoter and transcription of LTR retrotransposons.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. A 49-bp deletion ofHorticulture research · 2024
    Article
  10. AFrontiers in plant science · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Hanhui WangState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0001-9018-2896
Yanan LuState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-3791-7088
Tianxu ZhangState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-2242-1290
Zhi LiuState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.
Li CaoState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.
Qiaoying ChangState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0003-1666-586X
Yueying LiuState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-2803-3379
Xin LuState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-4929-7349
Song YuState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.
Huiyu LiState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.
Jing JiangState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0001-7679-495X
Guifeng LiuState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-5468-6293
Heike W SederoffDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0002-0960-9678
Ronald R SederoffState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0001-6819-7047
Qingzhu ZhangCollege of Life Science, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0001-8246-6688
Zhimin ZhengState Key Laboratory of Tree Genetics and Breeding, College of Forestry, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0003-2859-3066

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As essential organs of reproduction in angiosperms, flowers, and the genetic mechanisms of their development have been well characterized in many plant species but not in the woody tree yellowhorn (Xanthoceras sorbifolium). Here, we focused on the double flower phenotype in yellowhorn, which has high ornamental value. We found a candidate C-class gene, AGAMOUS1 (XsAG1), through bovine serum albumin sequencing and genetics analysis with a Long Interpersed Nuclear Elements 1 (LINE1) transposable element fragment (Xsag1-LINE1-1) inserted into its second intron that caused a loss-of-C-function and therefore the double flower phenotype. In situ hybridization of XsAG1 and analysis of the expression levels of other ABC genes were used to identify differences between single- and double-flower development processes. These findings enrich our understanding of double flower formation in yellowhorn and provide evidence that transposon insertions into genes can reshape plant traits in forest trees.

Indexed as

MagnoliopsidaSapindaceaeDNA Transposable ElementsFlowersGene Expression Regulation, PlantPhenotypeDNA Transposable Elements

Identifiers

PMID36494195
PMCPMC9922402

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.