Evidence map›Paper›PMID 36493776›Full record

ArticleCell reports. Medicine2022

A population-based study of precision health assessments using multi-omics network-derived biological functional modules.

Wei Zhang, Ziyun Wan, Xiaoyu Li, Rui Li, Lihua Luo, Zijun Song, Yu Miao, Zhiming Li, Shiyu Wang, Ying Shan and 21 more

Abstract read
In one paragraph

Article in Cell reports. Medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Multi-Omics Profiling for Health.Molecular & cellular proteomics : MCP · 2023
    Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

31 authors.

Wei ZhangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Ziyun WanBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Xiaoyu LiBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; BGI Education Center, University of the Chinese Academy of Sciences, Shenzhen 518083, China.
Rui LiBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Lihua LuoBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; BGI Education Center, University of the Chinese Academy of Sciences, Shenzhen 518083, China.
Zijun SongThe First Affiliated Hospital, Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou, China.
Yu MiaoBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; BGI Education Center, University of the Chinese Academy of Sciences, Shenzhen 518083, China.
Zhiming LiBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Shiyu WangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; BGI Education Center, University of the Chinese Academy of Sciences, Shenzhen 518083, China.
Ying ShanBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Yan LiBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Bangwei ChenBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China.
Hefu ZhenBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Yuzhe SunBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Mingyan FangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Jiahong DingBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Yizhen YanBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Yang ZongBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Zhen WangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Wenwei ZhangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Huanming YangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; James D. Watson Institute of Genome Sciences, Hangzhou 310058, China.
Shuang YangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Jian WangBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China; James D. Watson Institute of Genome Sciences, Hangzhou 310058, China.
Xin JinBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Ru WangSchool of Exercise and Health, Shanghai Frontiers Science Research Base of Exercise and Metabolic Health, Shanghai University of Sport, Shanghai, China.
Peijie ChenSchool of Exercise and Health, Shanghai Frontiers Science Research Base of Exercise and Metabolic Health, Shanghai University of Sport, Shanghai, China.
Junxia MinThe First Affiliated Hospital, Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou, China.
Yi ZengCenter for Healthy Aging and Development Studies, National School of Development, Peking University, Beijing, China.
Tao LiBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Xun XuBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China.
Chao NieBGI-Shenzhen, Shenzhen 518083, China; China National GeneBank, Shenzhen 518120, China. Electronic address: niechao@genomics.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent technological advances in multi-omics and bioinformatics provide an opportunity to develop precision health assessments, which require big data and relevant bioinformatic methods. Here we collect multi-omics data from 4,277 individuals. We calculate the correlations between pairwise features from cross-sectional data and then generate 11 biological functional modules (BFMs) in males and 12 BFMs in females using a community detection algorithm. Using the features in the BFM associated with cardiometabolic health, carotid plaques can be predicted accurately in an independent dataset. We developed a model by comparing individual data with the health baseline in BFMs to assess health status (BFM-ash). Then we apply the model to chronic patients and modify the BFM-ash model to assess the effects of consuming grape seed extract as a dietary supplement. Finally, anomalous BFMs are identified for each subject. Our BFMs and BFM-ash model have huge prospects for application in precision health assessment.

Indexed as

MultiomicsPrecision MedicineCross-Sectional StudiesFemaleHumansBFM-ash methodbiological functional modulescorrelationsdeitary intervention assessmentmulti-omicspersonal health assessment

Identifiers

PMID36493776
PMCPMC9798030

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.