Evidence map›Paper›PMID 36484109›Full record

ArticleNucleic acids research2023

Site-directed biochemical analyses reveal that the switchable C-terminus of Rpc31 contributes to RNA polymerase III transcription initiation.

Arvind Chandra Shekhar, Yuan-En Sun, Seok-Kooi Khoo, Yu-Chun Lin, Ester Betaria Malau, Wei-Hau Chang, Hung-Ta Chen

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Arvind Chandra ShekharInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, R.O.C.
Yuan-En SunInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, R.O.C.
Seok-Kooi KhooInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, R.O.C.
Yu-Chun LinInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, R.O.C.
Ester Betaria MalauInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, R.O.C.
Wei-Hau ChangInstitute of Chemistry, Academia Sinica, Taiwan, R.O.C.
Hung-Ta ChenInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, R.O.C.ORCID 0000-0003-1192-0382
Institute of Molecular Biology, Academia Sinica · TWInstitute of Chemistry, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rpc31 is a subunit in the TFIIE-related Rpc82/34/31 heterotrimeric subcomplex of Saccharomyces cerevisiae RNA polymerase III (pol III). Structural analyses of pol III have indicated that the N-terminal region of Rpc31 anchors on Rpc82 and further interacts with the polymerase core and stalk subcomplex. However, structural and functional information for the C-terminal region of Rpc31 is sparse. We conducted a mutational analysis on Rpc31, which uncovered a functional peptide adjacent to the highly conserved Asp-Glu-rich acidic C-terminus. This C-terminal peptide region, termed 'pre-acidic', is important for optimal cell growth, tRNA synthesis, and stable association of Rpc31 in the pre-initiation complex (PIC). Our site-directed photo-cross-linking to map protein interactions within the PIC reveal that this pre-acidic region specifically targets Rpc34 during transcription initiation, but also interacts with the DNA entry surface in free pol III. Thus, we have uncovered a switchable Rpc31 C-terminal region that functions in an initiation-specific protein interaction for pol III transcription.

Indexed as

RNA Polymerase IIISaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Initiation, GeneticActinsDrosophila ProteinsProtein BindingProtein DomainsRNA, TransferAct5C protein, DrosophilaActinsDrosophila ProteinsRNA Polymerase IIIRNA, TransferRPC34 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID36484109
PMCPMC10201443
OpenAlexW4310960012

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.