Evidence map›Paper›PMID 36481248›Full record

ArticleFungal genetics and biology : FG & B2023

Optimized fluorescent proteins for 4-color and photoconvertible live-cell imaging in Neurospora crassa.

Ziyan Wang, Bradley M Bartholomai, Jennifer J Loros, Jay C Dunlap

Open access · greenAbstract read
In one paragraph

Article in Fungal genetics and biology : FG & B, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Shining a light on the impact of antifungals onAntimicrobial agents and chemotherapy · 2024
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ziyan WangGeisel School of Medicine at Dartmouth, Department of Molecular and Systems Biology, Hanover, NH, USA.
Bradley M BartholomaiGeisel School of Medicine at Dartmouth, Department of Molecular and Systems Biology, Hanover, NH, USA.
Jennifer J LorosGeisel School of Medicine at Dartmouth, Department of Biochemistry and Cell Biology, Hanover, NH, USA.
Jay C DunlapGeisel School of Medicine at Dartmouth, Department of Molecular and Systems Biology, Hanover, NH, USA. Electronic address: jay.c.dunlap@dartmouth.edu.
Dartmouth College · US

Funding

Understanding the role of RNA-binding protein mutations in cancerP20GM113132 · NIGMS · DARTMOUTH COLLEGE · PI MADDEN, DEAN R · 2016 to 2025
$25.9M
Genetic and Molecular Dissection of the Neurospora ClockR35GM118021 · NIGMS · DARTMOUTH COLLEGE · PI Jay C. Dunlap · 2016 to 2026
$7.3M
Identification and Analysis of Circadian Clock-Controlled GenesR35GM118022 · NIGMS · DARTMOUTH COLLEGE · PI LOROS, JENNIFER J. · 2016 to 2021
$3.7M
NIGMS NIH HHS P20 GM113132NIGMS NIH HHS R35 GM118021NIGMS NIH HHS R35 GM118022
6 · The paper itself

Abstract

Fungal cells are quite unique among life in their organization and structure, and yet implementation of many tools recently developed for fluorescence imaging in animal systems and yeast has been slow in filamentous fungi. Here we present analysis of properties of fluorescent proteins in Neurospora crassa as well as describing genetic tools for the expression of these proteins that may be useful beyond cell biology applications. The brightness and photostability of ten different fluorescent protein tags were compared in a well-controlled system; six different promoters are described for the assessment of the fluorescent proteins and varying levels of expression, as well as a customizable bidirectional promoter system. We present an array of fluorescent proteins suitable for use across the visible light spectrum to allow for 4-color imaging, in addition to a photoconvertible fluorescent protein that enables a change in the color of a small subset of proteins in the cell. These tools build on the rich history of cell biology research in filamentous fungi and provide new tools to help expand research capabilities.

Indexed as

Neurospora crassaAnimalsColoring AgentsFungal ProteinsColoring AgentsFungal Proteins

Identifiers

PMID36481248
PMCPMC10501358
OpenAlexW4310725886

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.