Evidence map›Paper›PMID 36480076›Full record

ArticleBrain informatics2022

Inferring the temporal evolution of synaptic weights from dynamic functional connectivity.

Marco Celotto, Stefan Lemke, Stefano Panzeri

Abstract read
In one paragraph

Article in Brain informatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Marco CelottoDepartment of Excellence for Neural Information Processing, Center for Molecular Neurobiology (ZMNH), University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany. marco.celotto@zmnh.uni-hamburg.de.
Stefan LemkeNeural Computation Laboratory, Istituto Italiano di Tecnologia, Rovereto, Italy.
Stefano PanzeriDepartment of Excellence for Neural Information Processing, Center for Molecular Neurobiology (ZMNH), University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany. s.panzeri@uke.de.

Funding

Readout and control of spatiotemporal neuronal codes for behaviorU19NS107464 · NINDS · UNIVERSITY OF CHICAGO · PI SHOHAM, SHY · 2018 to 2022
$17.3M
H2020 Marie Skłodowska-Curie Actions 895379NIH HHS Brain Initiative U19 NS107464NINDS NIH HHS U19 NS107464
6 · The paper itself

Abstract

How to capture the temporal evolution of synaptic weights from measures of dynamic functional connectivity between the activity of different simultaneously recorded neurons is an important and open problem in systems neuroscience. Here, we report methodological progress to address this issue. We first simulated recurrent neural network models of spiking neurons with spike timing-dependent plasticity mechanisms that generate time-varying synaptic and functional coupling. We then used these simulations to test analytical approaches that infer fixed and time-varying properties of synaptic connectivity from directed functional connectivity measures, such as cross-covariance and transfer entropy. We found that, while both cross-covariance and transfer entropy provide robust estimates of which synapses are present in the network and their communication delays, dynamic functional connectivity measured via cross-covariance better captures the evolution of synaptic weights over time. We also established how measures of information transmission delays from static functional connectivity computed over long recording periods (i.e., several hours) can improve shorter time-scale estimates of the temporal evolution of synaptic weights from dynamic functional connectivity. These results provide useful information about how to accurately estimate the temporal variation of synaptic strength from spiking activity measures.

Indexed as

Communication delayCross-covarianceDynamic functional connectivitySpiking neural networkTransfer entropy

Identifiers

PMID36480076
PMCPMC9732068

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.