Evidence map›Paper›PMID 36479127›Full record

ReviewFrontiers in immunology2022

High-content CRISPR screening in tumor immunology.

Erin A Holcomb, Ashley N Pearson, Kassidy M Jungles, Akshay Tate, Jadyn James, Long Jiang, Amanda K Huber, Michael D Green

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Erin A HolcombGraduate Program in Immunology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Ashley N PearsonGraduate Program in Immunology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Kassidy M JunglesDepartment of Radiation Oncology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Akshay TateDepartment of Radiation Oncology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Jadyn JamesDepartment of Radiation Oncology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Long JiangDepartment of Radiation Oncology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Amanda K HuberDepartment of Radiation Oncology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
Michael D GreenGraduate Program in Immunology, School of Medicine, University of Michigan, Ann Arbor, MI, United States.
University of Michigan–Ann Arbor · US

Funding

INTERDEPARTMENTAL TRAINING IN PHARMACOLOGICAL SCIENCEST32GM007767 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ISOM, LORI L. · 1985 to 2019
$10.2M
RESEARCH TRAINING IN EXPERIMENTAL IMMUNOPATHOLOGYT32AI007413 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Bethany B. Moore · 1993 to 2026
$9.8M
NIAID NIH HHS T32 AI007413NIGMS NIH HHS T32 GM007767
6 · The paper itself

Abstract

CRISPR screening is a powerful tool that links specific genetic alterations to corresponding phenotypes, thus allowing for high-throughput identification of novel gene functions. Pooled CRISPR screens have enabled discovery of innate and adaptive immune response regulators in the setting of viral infection and cancer. Emerging methods couple pooled CRISPR screens with parallel high-content readouts at the transcriptomic, epigenetic, proteomic, and optical levels. These approaches are illuminating cancer immune evasion mechanisms as well as nominating novel targets that augment T cell activation, increase T cell infiltration into tumors, and promote enhanced T cell cytotoxicity. This review details recent methodological advances in high-content CRISPR screens and highlights the impact this technology is having on tumor immunology.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsProteomicsEpigenomicscancer immunotherapyCRISPR screenepigenetic readoutgenomic imagingproteomic readouttranscriptomic readouttumor immunology

Identifiers

PMID36479127
PMCPMC9721350
OpenAlexW4309747363

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.