Evidence map›Paper›PMID 36478509›Full record

ArticleEnvironmental microbiology2023

Kinetic modulation of bacterial hydrolases by microbial community structure in coastal waters.

Naiara Abad, Ainhoa Uranga, Begoña Ayo, Jesús Maria Arrieta, Zuriñe Baña, Iñigo Azúa, Itxaso Artolozaga, Juan Iriberri, Santos J González-Rojí, Marian Unanue

Abstract read
In one paragraph

Article in Environmental microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Naiara AbadDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.ORCID 0000-0001-6998-1159
Ainhoa UrangaDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.
Begoña AyoDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.ORCID 0000-0002-3073-9696
Jesús Maria ArrietaCanary Islands Oceanographic Center, Spanish Institute of Oceanography (IEO-CSIC), Santa Cruz, Spain.ORCID 0000-0002-0190-6950
Zuriñe BañaDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.ORCID 0000-0002-4210-2537
Iñigo AzúaDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.ORCID 0000-0002-0704-4060
Itxaso ArtolozagaDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.
Juan IriberriDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.ORCID 0000-0003-3787-6674
Santos J González-RojíOeschger Centre for Climate Change Research (OCCR), University of Bern, Bern, Switzerland.ORCID 0000-0003-4737-0984
Marian UnanueDepartment of Immunology, Microbiology and Parasitology, Faculty of Science and Technology, University of Basque Country (UPV/EHU), Leioa, Spain.ORCID 0000-0001-9718-6312

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we hypothesized that shifts in the kinetic parameters of extracellular hydrolytic enzymes may occur as a consequence of seasonal environmental disturbances and would reflect the level of adaptation of the bacterial community to the organic matter of the ecosystem. We measured the activities of enzymes that play a key role in the bacterial growth (leucine aminopeptidase, β- and α-glucosidases) in surface coastal waters of the Eastern Cantabrian Sea and determined their kinetic parameters by computing kinetic models of distinct complexity. Our results revealed the existence of two clearly distinct enzymatic systems operating at different substrate concentrations: a high-affinity system prevailing at low substrate concentrations and a low-affinity system characteristic of high substrate concentrations. These findings could be the result of distinct functional bacterial assemblages growing concurrently under sharp gradients of high-molecular-weight compounds. We constructed an ecological network based on contemporaneous and time-delayed correlations to explore the associations between the kinetic parameters and the environmental variables. The analysis revealed that the recurring phytoplankton blooms registered throughout the seasonal cycle trigger the wax and wane of those members of the bacterial community able to synthesize and secrete specific enzymes.

Indexed as

EcosystemMicrobiotaBacteriaHydrolasesPhytoplanktonSeawaterHydrolases

Identifiers

PMID36478509
PMCPMC10108013

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.