Evidence map›Paper›PMID 36477336›Full record

ArticlePlant physiology2023

A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea.

Virevol Thakro, Naveen Malik, Udita Basu, Rishi Srivastava, Laxmi Narnoliya, Anurag Daware, Nidhi Varshney, Jitendra K Mohanty, Deepak Bajaj, Vikas Dwivedi and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
10.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. A genome-wide association analysis identifies a key candidate gene controlling plant growth habit in chickpea.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  5. Review
  6. Review
  7. Phytohormones and related genes function as physiological and molecular switches regulating water stress response in the sunflower.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Article
  8. Article
  9. Article
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Virevol ThakroGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-1642-7530
Naveen MalikGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0001-6055-8602
Udita BasuGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-8231-5238
Rishi SrivastavaGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-1433-1666
Laxmi NarnoliyaGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-9341-8451
Anurag DawareGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-6208-142X
Nidhi VarshneyGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0001-7308-3554
Jitendra K MohantyGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0001-8990-6543
Deepak BajajGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-1077-7900
Vikas DwivediGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0002-7793-4640
Shailesh TripathiDivision of Genetics, Indian Agricultural Research Institute (IARI), New Delhi 110012, India.ORCID 0000-0001-5142-3781
Uday Chand JhaCrop Improvement Division, Indian Institute of Pulses Research (IIPR), Kanpur 208024, India.ORCID 0000-0002-3624-8820
Girish Prasad DixitCrop Improvement Division, Indian Institute of Pulses Research (IIPR), Kanpur 208024, India.ORCID 0000-0002-5820-3818
Ashok K SinghDivision of Genetics, Indian Agricultural Research Institute (IARI), New Delhi 110012, India.
Akhilesh K TyagiGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0001-9096-7116
Hari D UpadhyayaGenebank, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru 502324, Telangana, India.ORCID 0000-0002-5166-6844
Swarup K ParidaGenomics-assisted Breeding and Crop Improvement Laboratory, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India.ORCID 0000-0001-7843-3031
National Institute of Plant Genome Research · INIndian Agricultural Research Institute · INIndian Institute of Pulses Research · INInternational Crops Research Institute for the Semi-Arid Tropics · INUniversity of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying potential molecular tags for drought tolerance is essential for achieving higher crop productivity under drought stress. We employed an integrated genomics-assisted breeding and functional genomics strategy involving association mapping, fine mapping, map-based cloning, molecular haplotyping and transcript profiling in the introgression lines (ILs)- and near isogenic lines (NILs)-based association panel and mapping population of chickpea (Cicer arietinum). This combinatorial approach delineated a bHLH (basic helix-loop-helix) transcription factor, CabHLH10 (Cicer arietinum bHLH10) underlying a major QTL, along with its derived natural alleles/haplotypes governing yield traits under drought stress in chickpea. CabHLH10 binds to a cis-regulatory G-box promoter element to modulate the expression of RD22 (responsive to desiccation 22), a drought/abscisic acid (ABA)-responsive gene (via a trans-expression QTL), and two strong yield-enhancement photosynthetic efficiency (PE) genes. This, in turn, upregulates other downstream drought-responsive and ABA signaling genes, as well as yield-enhancing PE genes, thus increasing plant adaptation to drought with reduced yield penalty. We showed that a superior allele of CabHLH10 introgressed into the NILs improved root and shoot biomass and PE, thereby enhancing yield and productivity during drought without compromising agronomic performance. Furthermore, overexpression of CabHLH10 in chickpea and Arabidopsis (Arabidopsis thaliana) conferred enhanced drought tolerance by improving root and shoot agro-morphological traits. These findings facilitate translational genomics for crop improvement and the development of genetically tailored, climate-resilient, high-yielding chickpea cultivars.

Indexed as

CicerQuantitative Trait LociAbscisic AcidAllelesDrought ResistanceDroughtsPlant BreedingStress, PhysiologicalAbscisic Acid

Identifiers

PMID36477336
PMCPMC10022645
OpenAlexW4310961807

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.