Evidence map›Paper›PMID 36476596›Full record

ArticleScientific data2022

Cov-caldas: A new COVID-19 chest X-Ray dataset from state of Caldas-Colombia.

Jesús Alejandro Alzate-Grisales, Alejandro Mora-Rubio, Harold Brayan Arteaga-Arteaga, Mario Alejandro Bravo-Ortiz, Daniel Arias-Garzón, Luis Humberto López-Murillo, Esteban Mercado-Ruiz, Juan Pablo Villa-Pulgarin, Oscar Cardona-Morales, Simon Orozco-Arias and 11 more

Abstract read
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Jesús Alejandro Alzate-GrisalesDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia. jesus.alzateg@autonoma.edu.co.ORCID 0000-0003-1021-2050
Alejandro Mora-RubioDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Harold Brayan Arteaga-ArteagaDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.ORCID 0000-0002-2341-5079
Mario Alejandro Bravo-OrtizDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.ORCID 0000-0003-3560-1300
Daniel Arias-GarzónDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Luis Humberto López-MurilloDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Esteban Mercado-RuizDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Juan Pablo Villa-PulgarinDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.ORCID 0000-0003-1263-7618
Oscar Cardona-MoralesDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Simon Orozco-AriasDepartment of Computer Science, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Felipe Buitrago-CarmonaDepartment of Computer Science, Universidad Autónoma de Manizales, Manizales, 170001, Colombia.
Maria Jose Palancares-SosaBiotechnology Interdisciplinar Professional Unit, Instituto Politécnico Nacional, Ciudad de México, 07300, México.
Fernanda Martínez-RodríguezDepartment of Translational Bioengineering, Universidad de Guadalajara, Guadalajara, 44430, México.ORCID 0000-0003-0855-2128
Sonia H Contreras-OrtizSchool of Engineering, Universidad Tecnológica de Bolívar, Cartagena de Indias, 130001, Colombia.
Jose Manuel Saborit-TorresUnidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitario y Biomédica de la Comunidad Valenciana, Valencia, 46020, Spain.ORCID 0000-0002-2445-6075
Joaquim Ángel Montell SerranoUnidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitario y Biomédica de la Comunidad Valenciana, Valencia, 46020, Spain.
María Mónica Ramirez-SánchezUnidad Imágenes Diagnósticas, S.E.S Hospital Universitario de Caldas, Manizales, 170004, Colombia.
Mario Alfonso Sierra-GaberUnidad Imágenes Diagnósticas, S.E.S Hospital Universitario de Caldas, Manizales, 170004, Colombia.
Oscar Jaramillo-RobledoUnidad Imágenes Diagnósticas, S.E.S Hospital Universitario de Caldas, Manizales, 170004, Colombia.
Maria de la Iglesia-VayáUnidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitario y Biomédica de la Comunidad Valenciana, Valencia, 46020, Spain. delaiglesia_mar@gva.es.
Reinel Tabares-SotoDepartment of Electronics and Automation, Universidad Autónoma de Manizales, Manizales, 170001, Colombia. rtabares@autonoma.edu.co.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of COVID-19 as a global pandemic forced researchers worldwide in various disciplines to investigate and propose efficient strategies and/or technologies to prevent COVID-19 from further spreading. One of the main challenges to be overcome is the fast and efficient detection of COVID-19 using deep learning approaches and medical images such as Chest Computed Tomography (CT) and Chest X-ray images. In order to contribute to this challenge, a new dataset was collected in collaboration with "S.E.S Hospital Universitario de Caldas" ( https://hospitaldecaldas.com/ ) from Colombia and organized following the Medical Imaging Data Structure (MIDS) format. The dataset contains 7,307 chest X-ray images divided into 3,077 and 4,230 COVID-19 positive and negative images. Images were subjected to a selection and anonymization process to allow the scientific community to use them freely. Finally, different convolutional neural networks were used to perform technical validation. This dataset contributes to the scientific community by tackling significant limitations regarding data quality and availability for the detection of COVID-19.

Indexed as

COVID-19ColombiaHumansX-Rays

Identifiers

PMID36476596
PMCPMC9729565

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.