Evidence map›Paper›PMID 36475867›Full record

ArticleJournal of virology2023

Nonproductive Hepatitis B Virus Covalently Closed Circular DNA Generates HBx-Related Transcripts from the HBx/Enhancer I Region and Acquires Reactivation by Superinfection in Single Cells.

Bo Peng, Zhiyi Jing, Zhongmin Zhou, Yinyan Sun, Guilan Guo, Zexi Tan, Yan Diao, Qiyan Yao, Yi Ping, Xuelei Li and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Bo PengGraduate program in School of Life Sciences, Peking University, Beijing, China.
Zhiyi JingNational Institute of Biological Sciences, Beijing, China.
Zhongmin ZhouNational Institute of Biological Sciences, Beijing, China.
Yinyan SunNational Institute of Biological Sciences, Beijing, China.
Guilan GuoNational Institute of Biological Sciences, Beijing, China.
Zexi TanNational Institute of Biological Sciences, Beijing, China.
Yan DiaoNational Institute of Biological Sciences, Beijing, China.
Qiyan YaoNational Institute of Biological Sciences, Beijing, China.
Yi PingNational Institute of Biological Sciences, Beijing, China.
Xuelei LiNational Institute of Biological Sciences, Beijing, China.
Tengfei RenNational Institute of Biological Sciences, Beijing, China.
Bin LiNational Institute of Biological Sciences, Beijing, China.
Wenhui LiNational Institute of Biological Sciences, Beijing, China.ORCID 0000-0003-1305-7404
National Institute of Biological Sciences, Beijing · CNBeijing Normal University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNPeking University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B virus (HBV) infection remains a public health problem worldwide. Persistent HBV infection relies on active transcription of the covalently closed circular DNA (cccDNA) in hepatocytes, which is less understood at the single-cell level. In this study, we isolated primary human hepatocytes from liver-humanized FRG mice infected with HBV and examined cccDNA transcripts in single cells based on 5' end sequencing. Our 5' transcriptome sequencing (RNA-seq) analysis unambiguously assigns different viral transcripts with overlapping 3' sequences and quantitatively measures viral transcripts for structural genes (3.5 kb, 2.4 kb, and 2.1 kb) and the nonstructural X gene (0.7 kb and related) in single cells. We found that an infected cell either can generate all viral transcripts, signifying active transcription, or presents only transcripts from the X gene and its associated enhancer I domain and no structural gene transcripts. Results from cell infection assays with recombinant HBV show that nonproductive transcription of cccDNA can be activated by incoming virus through superinfection. Moreover, upon HBV infection, cccDNA apparently can be transcribed in the absence of HBx and produces HBx, needed for productive transcription of other viral genes. These results shed new light on cccDNA transcription at the single-cell level and provide insights useful for improving the treatment strategy against chronic HBV infection.

Indexed as

DNA, CircularHepatitis B, ChronicSuperinfectionAnimalsDNA, ViralHepatitis B virusHepatocytesHumansMiceTrans-ActivatorsViral Regulatory and Accessory ProteinsVirus ReplicationDNA, CircularDNA, Viralhepatitis B virus X proteinTrans-ActivatorsViral Regulatory and Accessory ProteinscccDNAhepatitis B virussingle cell sequencetranscription

Identifiers

PMID36475867
PMCPMC9888189
OpenAlexW4310956964

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.