Evidence map›Paper›PMID 36475605›Full record

ArticleAnalytical chemistry2022

Matrix-Landing Mass Spectrometry for Electron Microscopy Imaging of Native Protein Complexes.

Austin Z Salome, Kenneth W Lee, Timothy Grant, Michael S Westphall, Joshua J Coon

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  6. Article
  7. Mass spectrometers as cryoEM grid preparation instruments.Current opinion in structural biology · 2023
    Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Austin Z SalomeDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53715, United States.ORCID 0000-0001-7360-3759
Kenneth W LeeDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53715, United States.ORCID 0000-0003-4477-4553
Timothy GrantDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53715, United States.
Michael S WestphallDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53715, United States.
Joshua J CoonDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53715, United States.ORCID 0000-0002-0004-8253
University of Wisconsin–Madison · US

Funding

Structure, Function and Regulation of the ProteomeR35GM118110 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2016 to 2025
$9.1M
NIGMS NIH HHS R35 GM118110
6 · The paper itself

Abstract

Recently, we described the use of a chemical matrix for landing and preserving the cations of protein-protein complexes within a mass spectrometer (MS) instrument. By use of a glycerol-landing matrix, we used negative stain transmission electron microscopy (TEM) to obtain a three-dimensional (3D) reconstruction of landed GroEL complexes. Here, we investigate the utilities of other chemical matrices for their abilities to land, preserve, and allow for direct imaging of these cationic particles using TEM. We report here that poly(propylene) glycol (PPG) offers superior performance over glycerol for matrix landing. We demonstrated the utility of the PPG matrix landing using three protein-protein complexes─GroEL, the 20S proteasome core particle, and β-galactosidase─and obtained a 3D reconstruction of each complex from matrix-landed particles. These structures have no detectable differences from the structures obtained using conventional preparation methods, suggesting the structures are well preserved at least to the resolution limit of the reconstructions (∼20 Å). We conclude that matrix landing offers a direct approach to couple native MS with TEM for protein structure determination.

Indexed as

GlycerolProteinsMass SpectrometryMicroscopy, ElectronGlycerolProteins

Identifiers

PMID36475605
PMCPMC9951558
OpenAlexW4312082421

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.