Evidence map›Paper›PMID 36474442›Full record

ArticleBiophysical journal2023

Molecular simulations and NMR reveal how lipid fluctuations affect membrane mechanics.

Milka Doktorova, George Khelashvili, Rana Ashkar, Michael F Brown

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Biophysical journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Milka DoktorovaDepartment of Molecular Physiology and Biological Physics, University of Virginia School of Medicine, Charlottesville, Virginia. Electronic address: md4xm@virginia.edu.
George KhelashviliDepartment of Physiology and Biophysics, Weill Cornell Medical College of Cornell University, New York, New York; Institute of Computational Biomedicine, Weill Cornell Medical College of Cornell University, New York, New York.
Rana AshkarDepartment of Physics, Virginia Tech, Blacksburg, Virginia; Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia.
Michael F BrownDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona; Department of Physics, University of Arizona, Tucson, Arizona; Program in Applied Mathematics, University of Arizona, Tucson, Arizona. Electronic address: mfbrown@u.arizona.edu.
Cornell University · USUniversity of Arizona · USUniversity of Virginia · USVirginia Tech · US

Funding

MEMBRANE BASIS OF VISUAL EXCITATIONR01EY026041 · NEI · UNIVERSITY OF ARIZONA · PI BROWN, MICHAEL F · 2016 to 2018
$1.1M
Transient loss of plasma membrane asymmetry in mammalian cells: mechanisms and functionF32GM134704 · NIGMS · UNIVERSITY OF VIRGINIA · PI DOKTOROVA, MILKA · 2020 to 2022
$204k
NEI NIH HHS R01 EY026041NIGMS NIH HHS F32 GM134704
6 · The paper itself

Abstract

Lipid bilayers form the main matrix of functional cell membranes, and their dynamics underlie a host of physical and biological processes. Here we show that elastic membrane properties and collective molecular dynamics (MD) are related by the mean-square amplitudes (order parameters) and relaxation rates (correlation times) of lipid acyl chain motions. We performed all-atom MD simulations of liquid-crystalline bilayers that allow direct comparison with carbon-hydrogen (CH) bond relaxations measured with NMR spectroscopy. Previous computational and theoretical approaches have assumed isotropic relaxation, which yields inaccurate description of lipid chain dynamics and incorrect data interpretation. Instead, the new framework includes a fixed bilayer normal (director axis) and restricted anisotropic motion of the CH bonds in accord with their segmental order parameters, enabling robust validation of lipid force fields. Simulated spectral densities of thermally excited CH bond fluctuations exhibited well-defined spin-lattice (Zeeman) relaxations analogous to those in NMR measurements. Their frequency signature could be fit to a simple power-law function, indicative of nematic-like collective dynamics. Moreover, calculated relaxation rates scaled as the squared order parameters yielding an apparent κ

Indexed as

Lipid BilayersMagnetic Resonance ImagingCarbonCell MembraneMagnetic Resonance SpectroscopyMolecular Dynamics SimulationCarbonLipid Bilayers

Identifiers

PMID36474442
PMCPMC10111610
OpenAlexW4310714332

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.