ArticleBMC plant biology2022
Evolution and functional analysis of the GRAS family genes in six Rosaceae species.
Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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12 citing papers in PubMed, 22 citations in OpenAlex.
- Genome-Wide Identification of the GRAS Transcription Factor Family inInternational journal of molecular sciences · 2026Article
- Exploration of the GRAS family in Dimocarpus longan: identification, characterization, expression analysis and DlGRAS24 role in flowering time.BMC plant biology · 2025Article
- Genome-wide characterization of GRAS gene family and their expression profiles under diverse biotic and abiotic stresses in Amorphophallus konjac.BMC genomics · 2025Article
- Decoding the GRAS code: evolutionary phylogeny and functional diversification of a key gene family in Populus simonii.BMC plant biology · 2025Article
- Genomic Phylogenetic Analysis ofEcology and evolution · 2025Article
- Genome-Wide Identification ofBiology · 2025Article
- Biological Effects ofPlants (Basel, Switzerland) · 2025Review
- Genome-Wide Identification and Characterization of GRAS Transcription Factor Family in Cultivated Hybrid Sugarcane ZZ1 (International journal of molecular sciences · 2024Article
- Article
- Genome-wide identification and expression analysis of GRAS gene family in Eucalyptus grandis.BMC plant biology · 2024Article
- Genome-Wide Identification and Expression Analysis of the GRAS Gene Family and Their Responses to Heat Stress inInternational journal of molecular sciences · 2024Article
- Large-scale analysis of putative Euphorbiaceae R2R3-MYB transcription factors identifies a MYB involved in seed oil biosynthesis.BMC plant biology · 2023Article
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4 authors at 2 institutions in 1 country.
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Abstract
backgroundGRAS genes formed one of the important transcription factor gene families in plants, had been identified in several plant species. The family genes were involved in plant growth, development, and stress resistance. However, the comparative analysis of GRAS genes in Rosaceae species was insufficient.
resultsIn this study, a total of 333 GRAS genes were identified in six Rosaceae species, including 51 in strawberry (Fragaria vesca), 78 in apple (Malus domestica), 41 in black raspberry (Rubus occidentalis), 59 in European pear (Pyrus communis), 56 in Chinese rose (Rosa chinensis), and 48 in peach (Prunus persica). Motif analysis showed the VHIID domain, SAW motif, LR I region, and PFYRE motif were considerably conserved in the six Rosaceae species. All GRAS genes were divided into 10 subgroups according to phylogenetic analysis. A total of 15 species-specific duplicated clades and 3 lineage-specific duplicated clades were identified in six Rosaceae species. Chromosomal localization presented the uneven distribution of GRAS genes in six Rosaceae species. Duplication events contributed to the expression of the GRAS genes, and Ka/Ks analysis suggested the purification selection as a major force during the evolution process in six Rosaceae species. Cis-acting elements and GO analysis revealed that most of the GRAS genes were associated with various environmental stress in six Rosaceae species. Coexpression network analysis showed the mutual regulatory relationship between GRAS and bZIP genes, suggesting the ability of the GRAS gene to regulate abiotic stress in woodland strawberry. The expression pattern elucidated the transcriptional levels of FvGRAS genes in various tissues and the drought and salt stress in woodland strawberry, which were verified by RT-qPCR analysis.
conclusionsThe evolution and functional analysis of GRAS genes provided insights into the further understanding of GRAS genes on the abiotic stress of Rosaceae species.
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