Evidence map›Paper›PMID 36468984›Full record

ArticleBlood cancer discovery2023

In Vivo Modeling of CLL Transformation to Richter Syndrome Reveals Convergent Evolutionary Paths and Therapeutic Vulnerabilities.

Elisa Ten Hacken, Tomasz Sewastianik, Shanye Yin, Gabriela Brunsting Hoffmann, Michaela Gruber, Kendell Clement, Livius Penter, Robert A Redd, Neil Ruthen, Sébastien Hergalant and 30 more

Open access · greenAbstract read
In one paragraph

Article in Blood cancer discovery, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Science translational medicine · 2024
    Article
  12. Review
  13. Review
  14. Richter transformation-is there light at the end of this tunnel?Hematology. American Society of Hematology. Education Program · 2023
    Review
  15. ZNF683 marks a CD8Cancer cell · 2023
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 13 institutions in 8 countries.

Elisa Ten Hacken *Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-1573-8799
Tomasz Sewastianik *Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-4603-8517
Shanye Yin *Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0001-9116-5238
Gabriela Brunsting HoffmannDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0001-7758-898X
Michaela GruberCEMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID 0000-0001-5263-3449
Kendell ClementBroad Institute of MIT and Harvard, Cambridge, Massachusetts.ORCID 0000-0003-3808-0811
Livius PenterDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-9060-0207
Robert A ReddDepartment of Data Science, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-1329-5288
Neil RuthenTranslational Immunogenomics Lab, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-4409-9503
Sébastien HergalantInserm UMRS1256 Nutrition-Génétique et Exposition aux Risques Environnementaux (N-GERE), Université de Lorraine, Nancy, France.ORCID 0000-0001-8456-7992
Alanna SholokhovaDepartment of Applied Mathematics, University of Washington, Seattle, Washington.ORCID 0000-0001-8090-7793
Geoffrey FellDepartment of Data Science, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0001-6436-6691
Erin M ParryDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-3382-9769
Julien BroséusInserm UMRS1256 Nutrition-Génétique et Exposition aux Risques Environnementaux (N-GERE), Université de Lorraine, Nancy, France.ORCID 0000-0002-6689-4006
Romain GuiezeCHU Clermont Ferrand, Clermont Ferrand, France.ORCID 0000-0001-7563-580X
Fabienne LucasHarvard Medical School, Boston, Massachusetts.ORCID 0000-0002-4388-0349
María Hernández-SánchezDepartment of Biochemistry and Molecular Biology, Pharmacy School, Universidad Complutense de Madrid, Madrid, Spain.ORCID 0000-0001-9968-2782
Kaitlyn BaranowskiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-4531-3791
Jackson SouthardTranslational Immunogenomics Lab, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-3025-9406
Heather JoyalDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0001-5328-1772
Leah BillingtonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0001-7325-2258
Fara Faye D RegisDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-1549-9495
Elizabeth WittenDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-9267-4066
Mohamed UdumanDepartment of Data Science, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-9725-0705
Binyamin A KnisbacherBroad Institute of MIT and Harvard, Cambridge, Massachusetts.ORCID 0000-0002-4962-9956
Shuqiang LiBroad Institute of MIT and Harvard, Cambridge, Massachusetts.ORCID 0000-0001-9106-6141
Haoxiang LyuTranslational Immunogenomics Lab, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-0165-9934
Tiziana VaisittiDepartment of Medical Sciences, University of Torino, Turin, Italy.ORCID 0000-0002-3375-6985
Silvia DeaglioDepartment of Medical Sciences, University of Torino, Turin, Italy.ORCID 0000-0003-0632-5036
Giorgio InghiramiDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York.ORCID 0000-0001-5566-0864
Pierre FeugierInserm UMRS1256 Nutrition-Génétique et Exposition aux Risques Environnementaux (N-GERE), Université de Lorraine, Nancy, France.ORCID 0000-0003-2190-3527
Stephan StilgenbauerDepartment III of Internal Medicine III, Division of CLL, Ulm University, Ulm, Germany.ORCID 0000-0002-6830-9296
Eugen TauschDepartment III of Internal Medicine III, Division of CLL, Ulm University, Ulm, Germany.ORCID 0000-0002-9503-1226
Matthew S DavidsDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-4529-2003
Gad GetzBroad Institute of MIT and Harvard, Cambridge, Massachusetts.ORCID 0000-0002-0936-0753
Kenneth J LivakBroad Institute of MIT and Harvard, Cambridge, Massachusetts.ORCID 0000-0001-9105-5856
Ivana BozicDepartment of Applied Mathematics, University of Washington, Seattle, Washington.ORCID 0000-0003-2761-825X
Donna S NeubergDepartment of Data Science, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-2566-3145
Ruben D CarrascoHarvard Medical School, Boston, Massachusetts.ORCID 0000-0001-6849-1852
Catherine J WuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-3348-5054
Dana-Farber Cancer Institute · USBroad Institute · USBrigham and Women's Hospital · USHarvard University · USInserm · FRDepartment of Medical Sciences · BYUniversität Ulm · DEUniversity of Washington · USCeMM Research Center for Molecular Medicine · ATCentre Hospitalier Universitaire de Clermont-Ferrand · FRCornell University · USHumboldt-Universität zu Berlin · DEUniversidad Complutense de Madrid · ES

Funding

ProteomicsP01CA206978 · NCI · DANA-FARBER CANCER INST · PI WU, CATHERINE JU-YING · 2016 to 2025
$17.0M
(PQ8) Genetically faithful murine models for studying disease progression in chronic lymphocytic leukemiaR01CA216273 · NCI · DANA-FARBER CANCER INST · PI WANG, LILI, WU, CATHERINE JU-YING · 2017 to 2021
$3.5M
Single cell investigation of co-evolution in cancer cells and host cell immune microenvironmentR50CA251956 · NCI · DANA-FARBER CANCER INST · PI Shuqiang Li · 2020 to 2026
$1.4M
Tracing the Evolution of Chronic Lymphocytic Leukemia to Richter's Syndrome: Defining TransformationK08CA270085 · NCI · DANA-FARBER CANCER INST · PI Erin M Parry · 2022 to 2026
$945k
Defining the impact of mutational drivers on the immune microenvironment of CLLR21CA267527 · NCI · DANA-FARBER CANCER INST · PI WU, CATHERINE JU-YING, YIN, SHANYE · 2022 to 2023
$454k
Pan-disease characterization of DNA methylation dysregulationK99HG011658 · NHGRI · MASSACHUSETTS GENERAL HOSPITAL · PI CLEMENT, KENDELL · 2021 to 2022
$344k
NCI NIH HHS K08 CA270085NCI NIH HHS P01 CA206978NCI NIH HHS R01 CA216273NCI NIH HHS R21 CA267527NCI NIH HHS R50 CA251956NHGRI NIH HHS K99 HG011658
6 · The paper itself

Abstract

Transformation to aggressive disease histologies generates formidable clinical challenges across cancers, but biological insights remain few. We modeled the genetic heterogeneity of chronic lymphocytic leukemia (CLL) through multiplexed in vivo CRISPR-Cas9 B-cell editing of recurrent CLL loss-of-function drivers in mice and recapitulated the process of transformation from indolent CLL into large cell lymphoma [i.e., Richter syndrome (RS)]. Evolutionary trajectories of 64 mice carrying diverse combinatorial gene assortments revealed coselection of mutations in Trp53, Mga, and Chd2 and the dual impact of clonal Mga/Chd2 mutations on E2F/MYC and interferon signaling dysregulation. Comparative human and murine RS analyses demonstrated tonic PI3K signaling as a key feature of transformed disease, with constitutive activation of the AKT and S6 kinases, downmodulation of the PTEN phosphatase, and convergent activation of MYC/PI3K transcriptional programs underlying enhanced sensitivity to MYC/mTOR/PI3K inhibition. This robust experimental system presents a unique framework to study lymphoid biology and therapy. SIGNIFICANCE: Mouse models reflective of the genetic complexity and heterogeneity of human tumors remain few, including those able to recapitulate transformation to aggressive disease histologies. Herein, we model CLL transformation into RS through multiplexed in vivo gene editing, providing key insight into the pathophysiology and therapeutic vulnerabilities of transformed disease. This article is highlighted in the In This Issue feature, p. 101.

Indexed as

Leukemia, Lymphocytic, Chronic, B-CellLymphoma, Large B-Cell, DiffuseLymphoma, Non-HodgkinAnimalsB-LymphocytesHumansMicePhosphatidylinositol 3-KinasesPhosphatidylinositol 3-Kinases

Identifiers

PMID36468984
PMCPMC9975769
OpenAlexW4311584212

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.