Evidence map›Paper›PMID 36467291›Full record

ArticleOpen forum infectious diseases2022

Subgenomic RNA Abundance Relative to Total Viral RNA Among Severe Acute Respiratory Syndrome Coronavirus 2 Variants.

Maxwell Su, Sara Ping, Phuong-Vi Nguyen, Alejandra Rojas, Laila Hussaini, Ludy Registre Carmola, Azmain Taz, Julie Sullivan, Greg S Martin, Anne Piantadosi and 4 more

Abstract read
In one paragraph

Article in Open forum infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Maxwell SuDivision of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA.
Sara PingDivision of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA.
Phuong-Vi NguyenDivision of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA.
Alejandra RojasDepartamento de Producción, Universidad Nacional de Asunción, Instituto de Investigaciones en Ciencias de la Salud, Asunción, Paraguay.
Laila HussainiDepartment of Pediatrics and Children's Healthcare of Atlanta, Emory University, Atlanta, Georgia, USA.
Ludy Registre CarmolaDepartment of Pathology, Emory University, Atlanta, Georgia, USA.
Azmain TazDepartment of Pathology, Emory University, Atlanta, Georgia, USA.
Julie SullivanAtlanta Center for Microsystems-Engineered Point-of-Care Technologies, Atlanta, Georgia, USA.
Greg S MartinAtlanta Center for Microsystems-Engineered Point-of-Care Technologies, Atlanta, Georgia, USA.
Anne PiantadosiDivision of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-5942-1534
Magaly MartinezDepartamento de Biología Molecular y Biotecnología, Universidad Nacional de Asunción, Instituto de Investigaciones en Ciencias de la Salud, Asunción, Paraguay.
Wilbur A LamDepartment of Pediatrics and Children's Healthcare of Atlanta, Emory University, Atlanta, Georgia, USA.
Evan J AndersonDivision of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-1576-4420
Jesse J WaggonerDivision of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-0244-5957

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
Training a New Generation of VaccinologistsT32AI074492 · NIAID · EMORY UNIVERSITY · PI Rama Rao Amara, Benjamin A Lopman · 2009 to 2026
$6.4M
NCATS NIH HHS UL1 TR002378NIAID NIH HHS T32 AI074492
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) subgenomic RNA (sgRNA) may indicate actively replicating virus, but sgRNA abundance has not been systematically compared between SARS-CoV-2 variants. sgRNA was quantified in 169 clinical samples by real-time reverse-transcription polymerase chain reaction, demonstrating similar relative abundance among known variants. Thus, sgRNA detection can identify individuals with active viral replication regardless of variant.

Indexed as

severe acute respiratory syndrome coronavirus 2subgenomic RNAvariants of concern

Identifiers

PMID36467291
PMCPMC9709700

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.