Evidence map›Paper›PMID 36465348›Full record

ArticleFrontiers in oncology2022

Single-cell transcriptomic analysis of the tumor ecosystem of adenoid cystic carcinoma.

Quanquan Lin, Zhanjie Fang, Jinlong Sun, Fei Chen, Yipeng Ren, Zhenhong Fu, Sefei Yang, Lin Feng, Feng Wang, Zhigang Song and 9 more

Abstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Quanquan LinDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Zhanjie FangKey Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, China.
Jinlong SunDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Fei ChenDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Yipeng RenDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Zhenhong FuDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Sefei YangDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Lin FengDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Feng WangDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Zhigang SongDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Wei ChenDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Wenjun YuDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Chen WangKey Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, China.
Yixin ShiKey Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, China.
Yue LiangKey Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, China.
Haizhong ZhangDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.
Hongzhu QuKey Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, China.
Xiangdong FangKey Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, China.
Qing XiDepartment of Stomatology, Chinese People's Liberation Army General Hospital, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenoid cystic carcinoma (ACC) is a malignant tumor that originates from exocrine gland epithelial cells. We profiled the transcriptomes of 49,948 cells from paracarcinoma and carcinoma tissues of three patients using single-cell RNA sequencing. Three main types of the epithelial cells were identified into myoepithelial-like cells, intercalated duct-like cells, and duct-like cells by marker genes. And part of intercalated duct-like cells with special copy number variations which altered with MYB family gene and EN1 transcriptomes were identified as premalignant cells. Developmental pseudo-time analysis showed that the premalignant cells eventually transformed into malignant cells. Furthermore, MYB and MYBL1 were found to belong to two different gene modules and were expressed in a mutually exclusive manner. The two gene modules drove ACC progression into different directions. Our findings provide novel evidence to explain the high recurrence rate of ACC and its characteristic biological behavior.

Indexed as

adenoid cystic carcinomaEN1head and neck cancerMYBsingle-cell transcriptomic analysis

Identifiers

PMID36465348
PMCPMC9714264

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.