Evidence map›Paper›PMID 36463529›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2023

Bivariate GWAS reveals pleiotropic regions among feed efficiency and beef quality-related traits in Nelore cattle.

Carlos Eduardo Buss, Juliana Afonso, Priscila S N de Oliveira, Juliana Petrini, Polyana Cristine Tizioto, Aline S M Cesar, Emanuele Cristina Gustani-Buss, Tainã Figueiredo Cardoso, Gregori A Rovadoski, Wellison Jarles da Silva Diniz and 7 more

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Exploring the SheepAnimals : an open access journal from MDPI · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 5 countries.

Carlos Eduardo BussDepartment of Genetic and Evolution, Federal University of São Carlos, São Carlos, São Paulo, Brazil.ORCID 0000-0003-2495-3618
Juliana AfonsoEmbrapa Southeast Cattle, Fazenda Canchim, Rodovia Washington Luiz, Km 234, S/N, São Carlos, São Paulo, Brazil.ORCID 0000-0002-4435-5386
Priscila S N de OliveiraDepartment of Genetic and Evolution, Federal University of São Carlos, São Carlos, São Paulo, Brazil.ORCID 0000-0002-7202-3629
Juliana PetriniDepartment of Animal Science, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.ORCID 0000-0003-3458-1619
Polyana Cristine TiziotoNGS Soluções Genômicas, Piracicaba, São Paulo, Brazil.ORCID 0000-0002-0761-6364
Aline S M CesarDepartment of Agroindustry, Food and Nutrition, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.ORCID 0000-0001-9921-214X
Emanuele Cristina Gustani-BussMindflow Genomics, Leuven, Flanders, Belgium.ORCID 0000-0003-4020-3921
Tainã Figueiredo CardosoEmbrapa Southeast Cattle, Fazenda Canchim, Rodovia Washington Luiz, Km 234, S/N, São Carlos, São Paulo, Brazil.ORCID 0000-0002-6038-7521
Gregori A RovadoskiDepartment of Animal Science, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.ORCID 0000-0003-0306-8839
Wellison Jarles da Silva DinizDepartment of Animal Sciences, Auburn University, Auburn, AL, USA.ORCID 0000-0003-1082-5535
Andressa Oliveira de LimaDivision of Medical Genetics, Department of Genomics Science, University of Washington, Seattle, WA, USA.ORCID 0000-0002-0470-8386
Marina Ibelli Pereira RochaDepartment of Genetic and Evolution, Federal University of São Carlos, São Carlos, São Paulo, Brazil.ORCID 0000-0003-1284-6137
Bruno Gabriel Nascimento AndradeEmbrapa Southeast Cattle, Fazenda Canchim, Rodovia Washington Luiz, Km 234, S/N, São Carlos, São Paulo, Brazil.ORCID 0000-0003-2481-401X
Jason B WolfDepartment of Biology & Biochemistry, Milner Centre for Evolution Bath, University of Bath, Bath, BA2 7AY, UK.ORCID 0000-0003-3112-6602
Luiz Lehmann CoutinhoDepartment of Animal Science, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.ORCID 0000-0002-7266-8881
Gerson Barreto MourãoDepartment of Animal Science, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.ORCID 0000-0002-0990-4108
Luciana Correia de Almeida RegitanoEmbrapa Southeast Cattle, Fazenda Canchim, Rodovia Washington Luiz, Km 234, S/N, São Carlos, São Paulo, Brazil. luciana.regitano@embrapa.br.ORCID 0000-0001-9242-8351
Brazilian Agricultural Research Corporation · BRUniversidade de São Paulo · BRUniversidade Federal de São Carlos · BRAuburn University · USRega Institute for Medical Research · BEUniversidade Metodista de São Paulo · BRUniversity of Bath · GBUniversity of Washington Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Feed-efficient cattle selection is among the most leading solutions to reduce cost for beef cattle production. However, technical difficulties in measuring feed efficiency traits had limited the application in livestock. Here, we performed a Bivariate Genome-Wide Association Study (Bi-GWAS) and presented candidate biological mechanisms underlying the association between feed efficiency and meat quality traits in a half-sibling design with 353 Nelore steers derived from 34 unrelated sires. A total of 13 Quantitative Trait Loci (QTL) were found explaining part of the phenotypic variations. An important transcription factor of adipogenesis in cattle, the TAL1 (rs133408775) gene located on BTA3 was associated with intramuscular fat and average daily gain (IMF-ADG), and a region located on BTA20, close to CD180 and MAST4 genes, both related to fat accumulation. We observed a low positive genetic correlation between IMF-ADG (r = 0.30 ± 0.0686), indicating that it may respond to selection in the same direction. Our findings contributed to clarifying the pleiotropic modulation of the complex traits, indicating new QTLs for bovine genetic improvement.

Indexed as

Genome-Wide Association StudyQuantitative Trait LociAnimalsCattleGene Expression RegulationMeatPhenotypePolymorphism, Single Nucleotide

Identifiers

PMID36463529
OpenAlexW4310668397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.