Evidence map›Paper›PMID 36463299›Full record

ReviewEpigenetics & chromatin2022

Shaking up the silence: consequences of HMGN1 antagonizing PRC2 in the Down syndrome brain.

Sean J Farley, Alla Grishok, Ella Zeldich

Open access · goldAbstract readReview
In one paragraph

Review in Epigenetics & chromatin, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sean J FarleyDepartment of Anatomy and Neurobiology, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA.
Alla Grishok *Department of Biochemistry, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA.
Ella Zeldich *Department of Anatomy and Neurobiology, Boston University Chobanian & Avedisian School of Medicine, Boston, MA, USA. ezeldich@bu.edu.
Boston University · US

Funding

The role of DOT1L methyltransferase in controlling the noncoding transcriptomeR01GM135199 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI GRISHOK, ALLA · 2020 to 2023
$1.4M
Epigenetic Determinants in Oligodendrocyte Maturation in Down SyndromeR21NS125469 · NINDS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI MEDALLA, MARIA, ZELDICH, ELLA · 2022 to 2022
$454k
NIGMS NIH HHS R01 GM135199NINDS NIH HHS R21 NS125469
6 · The paper itself

Abstract

Intellectual disability is a well-known hallmark of Down Syndrome (DS) that results from the triplication of the critical region of human chromosome 21 (HSA21). Major studies were conducted in recent years to gain an understanding about the contribution of individual triplicated genes to DS-related brain pathology. Global transcriptomic alterations and widespread changes in the establishment of neural lineages, as well as their differentiation and functional maturity, suggest genome-wide chromatin organization alterations in trisomy. High Mobility Group Nucleosome Binding Domain 1 (HMGN1), expressed from HSA21, is a chromatin remodeling protein that facilitates chromatin decompaction and is associated with acetylated lysine 27 on histone H3 (H3K27ac), a mark correlated with active transcription. Recent studies causatively linked overexpression of HMGN1 in trisomy and the development of DS-associated B cell acute lymphoblastic leukemia (B-ALL). HMGN1 has been shown to antagonize the activity of the Polycomb Repressive Complex 2 (PRC2) and prevent the deposition of histone H3 lysine 27 trimethylation mark (H3K27me3), which is associated with transcriptional repression and gene silencing. However, the possible ramifications of the increased levels of HMGN1 through the derepression of PRC2 target genes on brain cell pathology have not gained attention. In this review, we discuss the functional significance of HMGN1 in brain development and summarize accumulating reports about the essential role of PRC2 in the development of the neural system. Mechanistic understanding of how overexpression of HMGN1 may contribute to aberrant brain cell phenotypes in DS, such as altered proliferation of neural progenitors, abnormal cortical architecture, diminished myelination, neurodegeneration, and Alzheimer's disease-related pathology in trisomy 21, will facilitate the development of DS therapeutic approaches targeting chromatin.

Indexed as

BrainDown SyndromeHMGN1 ProteinPolycomb Repressive Complex 2ChromatinEpigenetic RepressionHistonesHumansLysineTrisomyChromatinHistonesHMGN1 ProteinLysinePolycomb Repressive Complex 2Chromatin remodelingEpigeneticsHistone modificationIntellectual disabilityNeurodegenerationNeurodevelopmentNucleosomePolycomb repressive complexTrisomy

Identifiers

PMID36463299
PMCPMC9719135
OpenAlexW4311207073

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.