Evidence map›Paper›PMID 36463279›Full record

ArticleNature communications2022

A conserved population of MHC II-restricted, innate-like, commensal-reactive T cells in the gut of humans and mice.

Carl-Philipp Hackstein, Dana Costigan, Linnea Drexhage, Claire Pearson, Samuel Bullers, Nicholas Ilott, Hossain Delowar Akther, Yisu Gu, Michael E B FitzPatrick, Oliver J Harrison and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Cytotoxic CD4Signal transduction and targeted therapy · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 2 countries.

Carl-Philipp HacksteinPeter Medawar Building for Pathogen Research, University of Oxford, Oxford, UK.ORCID 0000-0002-0821-5204
Dana CostiganMRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK.
Linnea DrexhageTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0001-7679-4466
Claire PearsonKennedy Institute of Rheumatology, NDORMS, University of Oxford, Oxford, UK.ORCID 0000-0001-5816-1657
Samuel BullersKennedy Institute of Rheumatology, NDORMS, University of Oxford, Oxford, UK.
Nicholas IlottKennedy Institute of Rheumatology, NDORMS, University of Oxford, Oxford, UK.ORCID 0000-0002-8432-8622
Hossain Delowar AktherPeter Medawar Building for Pathogen Research, University of Oxford, Oxford, UK.
Yisu GuKennedy Institute of Rheumatology, NDORMS, University of Oxford, Oxford, UK.
Michael E B FitzPatrickTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0003-2365-2012
Oliver J HarrisonCenter for Fundamental Immunology, Benaroya Research Institute, 1201 9th Ave, Seattle, WA, 98101, USA.ORCID 0000-0003-1515-9586
Lucy C GarnerTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0002-6461-252X
Elizabeth H MannKennedy Institute of Rheumatology, NDORMS, University of Oxford, Oxford, UK.ORCID 0000-0001-8339-2094
Sumeet PandeyTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Matthias FriedrichTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Nicholas M ProvineTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0002-9694-2216
Holm H UhligTranslational Gastroenterology Unit, and Biomedical Research Centre, and Department of Paediatrics, University of Oxford, Oxford, OX39DU, UK.ORCID 0000-0002-6111-7355
Emanuele MarchiTranslational Gastroenterology Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Fiona PowrieKennedy Institute of Rheumatology, NDORMS, University of Oxford, Oxford, UK.ORCID 0000-0003-3312-5929
Paul KlenermanPeter Medawar Building for Pathogen Research, University of Oxford, Oxford, UK. paul.klenerman@ndm.ox.ac.uk.ORCID 0000-0003-4307-9161
Emily E ThorntonMRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK. emily.thornton@imm.ox.ac.uk.ORCID 0000-0002-0068-2502
University of Oxford · GBUniversity of Washington · US

Funding

Virology CoreU19AI082630 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG, GEORG Michael LAUER · 2009 to 2026
$48.1M
Medical Research Council MC_UU_00008/6Medical Research Council MR/R014485/1NIAID NIH HHS U19 AI082630Wellcome Trust 212240/Z/18/Z
6 · The paper itself

Abstract

Interactions with commensal microbes shape host immunity on multiple levels and play a pivotal role in human health and disease. Tissue-dwelling, antigen-specific T cells are poised to respond to local insults, making their phenotype important in the relationship between host and microbes. Here we show that MHC-II restricted, commensal-reactive T cells in the colon of both humans and mice acquire transcriptional and functional characteristics associated with innate-like T cells. This cell population is abundant and conserved in the human and murine colon and endowed with polyfunctional effector properties spanning classic Th1- and Th17-cytokines, cytotoxic molecules, and regulators of epithelial homeostasis. T cells with this phenotype are increased in ulcerative colitis patients, and their presence aggravates pathology in dextran sodium sulphate-treated mice, pointing towards a pathogenic role in colitis. Our findings add to the expanding spectrum of innate-like immune cells positioned at the frontline of intestinal immune surveillance, capable of acting as sentinels of microbes and the local cytokine milieu.

Indexed as

ColitisAnimalsCytokinesHumansImmunologic SurveillanceLymphocyte CountMiceCytokines

Identifiers

PMID36463279
PMCPMC9719512
OpenAlexW4310784703

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.