Evidence map›Paper›PMID 36460821›Full record

ArticleScientific reports2022

Pan-cancer analysis based on epigenetic modification explains the value of HJURP in the tumor microenvironment.

Junwu Li, Jun Zheng, Ronggui Zhang, Weili Zhang, Junyong Zhang, Yuanfeng Zhang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Junwu Li *Department of Urology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Jun Zheng *Department of Urology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Ronggui ZhangDepartment of Urology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Weili ZhangDepartment of Urology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Junyong ZhangDepartment of Urology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Yuanfeng ZhangDepartment of Urology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China. 304100@cqmu.edu.cn.
Dalian Medical University · CNChongqing Medical University · CNSecond Affiliated Hospital of Chongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To analyze the expression levels, prognostic value and immune infiltration association of Holliday junction protein (HJURP) as well as its feasibility as a pan-cancer biomarker for different cancers. The Protter online tool was utilized to obtain the localization of HJURP, then the methylation of HJURP in tumors were further explored. Thereafter, the mRNA data and clinical characteristics of 33 tumor types from TCGA database were obtained to investigate the expression and prognostic relationship of HJURP in different tumor types. Finally, the composition pattern and immune infiltration of HJURP in different tumors were detected in Tumor Immune Estimation Resource. HJURP was abnormally expressed in most of the cancer types and subtypes in TCGA database. Also, it was associated with poor prognosis of different cohorts. At the same time, the results also showed that HJURP was related to tumor immune evasion through different mechanisms, including T cell rejection and methylation in different cancer types. Besides, the methylation of HJURP was inversely proportional to mRNA expression levels, which mediated the dysfunctional phenotypes of T cells and poor prognosis of different cancer types. Alternatively, our results indicated that HJURP expression was associated with immune cell infiltration in a variety of cancers. HJURP may serve as an oncogenic molecule, and its expression and immune infiltration characteristics can be used as a biomarker for cancer detection, prognosis, treatment design and follow-up.

Indexed as

NeoplasmsTumor MicroenvironmentDNA, CruciformEpigenesis, GeneticHumansRNA, MessengerDNA, CruciformRNA, Messenger

Identifiers

PMID36460821
PMCPMC9718852
OpenAlexW4311190469

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.