Evidence map›Paper›PMID 36459651›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

The molecular basis for pore pattern morphogenesis in diatom silica.

Christoph Heintze, Iaroslav Babenko, Jirina Zackova Suchanova, Alastair Skeffington, Benjamin M Friedrich, Nils Kröger

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Bio-Informed Porous Mineral-Based Composites.Small (Weinheim an der Bergstrasse, Germany) · 2025
    Review
  10. Hexagonal Patterns in Diatom Silica Form via a Directional Two-Step Process.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  11. Article
  12. Nanoengineered Silica-Based Biomaterials for Regenerative Medicine.International journal of molecular sciences · 2024
    Review
  13. Article
  14. Mechanism of branching morphogenesis inspired by diatom silica formation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Christoph HeintzeB CUBE, Center for Molecular and Cellular Bioengineering, TU Dresden, 01307 Dresden Germany.
Iaroslav BabenkoB CUBE, Center for Molecular and Cellular Bioengineering, TU Dresden, 01307 Dresden Germany.
Jirina Zackova SuchanovaB CUBE, Center for Molecular and Cellular Bioengineering, TU Dresden, 01307 Dresden Germany.ORCID 0000-0003-1484-0599
Alastair SkeffingtonCamborne School of Mines & Environment and Sustainability Institute, University of Exeter, Cornwall TR10 9FE, UK.
Benjamin M FriedrichCluster of Excellence Physics of Life, Technische Universität Dresden, 01062 Dresden, Germany.ORCID 0000-0002-9742-6555
Nils KrögerB CUBE, Center for Molecular and Cellular Bioengineering, TU Dresden, 01307 Dresden Germany.ORCID 0000-0002-8115-4129
Technische Universität Dresden · DEUniversity of Exeter · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biomineral-forming organisms produce inorganic materials with complex, genetically encoded morphologies that are unmatched by current synthetic chemistry. It is poorly understood which genes are involved in biomineral morphogenesis and how the encoded proteins guide this process. We addressed these questions using diatoms, which are paradigms for the self-assembly of hierarchically meso- and macroporous silica under mild reaction conditions. Proteomics analysis of the intracellular organelle for silica biosynthesis led to the identification of new biomineralization proteins. Three of these, coined dAnk1-3, contain a common protein-protein interaction domain (ankyrin repeats), indicating a role in coordinating assembly of the silica biomineralization machinery. Knocking out individual

Indexed as

DiatomsAnkyrin RepeatBiomineralizationMorphogenesisSilicon DioxideSilicon Dioxideankyrin-repeat domainbiomineralizationmesoporous silicaphase separationsilica deposition vesicle

Identifiers

PMID36459651
PMCPMC9894196
OpenAlexW4310786238

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.