Evidence map›Paper›PMID 36457716›Full record

ArticleJournal of oncology2022

Identification of a Prognostic Pyroptostic-Related Model for Head and Neck Squamous Cell Carcinoma Based on LASSO-Cox Regression Analysis.

Donglei Wu, Wanting Fan, Zheng Zhang, Jianming Tang, Chenping Zhang, Weixuan Chen, Nianhong Qin, Yuyan Zheng

Open access · hybridAbstract read
In one paragraph

Article in Journal of oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Donglei WuDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0003-0529-5744
Wanting FanDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0002-5543-5779
Zheng ZhangDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0003-2099-6055
Jianming TangDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0003-3673-9336
Chenping ZhangDepartment of Anesthesia, The First Affiliate Hospital of Guangzhou Medical University, Guangzhou, China.ORCID https://orcid.org/0000-0002-2956-9351
Weixuan ChenDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0003-4739-891X
Nianhong QinDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0001-8573-0800
Yuyan ZhengDepartment of Stomatology, Shenzhen People's Hospital, Shenzhen, China.ORCID https://orcid.org/0000-0002-6000-3030
ShenZhen People’s Hospital · CNFirst Affiliated Hospital of Guangzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pyroptosis is associated with the biological behavior of the tumor and with tumor immunity. We investigated the effect of pyroptosis on the tumor microenvironment and tumor immunity in head and neck squamous cell carcinoma (HNSCC). RNA sequencing data and clinical information of HNSCC were downloaded from TCGA. Differentially expressed pyroptosis-related genes in HNSCC were identified between HNSCC and normal tissue. Pyroptosis-related classification of HNSCC was conducted based on consensus clustering analysis. LASSO-Cox regression analysis was used to construct a prognostic risk model-based pyroptosis-related gene. Evaluation of the immune microenvironment was conducted in prognostic risk signature based on pyroptosis-related genes. Total 22 differentially expressed pyroptosis-related genes were identified in HNSCC. Six prognostic-related genes were included to construct a LASSO regression model with a prognostic risk score = (0.133 ∗ GSDME (DFNA5) + 0.084 ∗ NOD1 + 0.039 ∗ IL6 + 0.003 ∗ IL1B + 0.084 ∗ CASP3 + 0.028 ∗ NLRP2). Higher fraction of resting memory CD4+ T cells and macrophages M1 was infiltrated in the high-risk group compared with the low-risk group in HNSCC. Furthermore, the PI3K-Akt signaling pathway and the IL-17 signaling pathways were identified to be involved in the development of high-risk HNSCC. Our study constructed a prognostic risk signature based on pyroptosis-related genes, which emphasizes the critical importance of pyroptosis in HNSCC and provided a novel perspective of HNSCC therapy.

Identifiers

PMID36457716
PMCPMC9708347
OpenAlexW4309639649

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.