Evidence map›Paper›PMID 36457253›Full record

ArticleJournal of chemical information and modeling2022

Unraveling the Abnormal Molecular Mechanism of Suicide Inhibition of Cytochrome P450 3A4.

Yang Zhou, Junhao Li, Glib Baryshnikov, Yaoquan Tu

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Journal of chemical information and modeling, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Yang ZhouSchool of Pharmacy, Jinan University, 601 Huangpu Avenue West, Guangzhou510632, China.ORCID 0000-0003-4167-6413
Junhao LiDepartment of Theoretical Chemistry and Biology, KTH Royal Institute of Technology, 114 28Stockholm, Sweden.
Glib BaryshnikovLaboratory of Organic Electronics, Department of Science and Technology, Linköping University, 60174Norrköping, Sweden.ORCID 0000-0002-0716-3385
Yaoquan TuDepartment of Theoretical Chemistry and Biology, KTH Royal Institute of Technology, 114 28Stockholm, Sweden.ORCID 0000-0001-8198-9284
KTH Royal Institute of Technology · SEJinan University · CNLinköping University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Suicide inhibition of the CYP3A4 enzyme by a drug inactivates the enzyme in the drug biotransformation process and often shows safety concerns about the drug. Despite extensive experimental studies, the abnormal molecular mechanism of a suicide inhibitor that forms a covalent bond with the residue far away from the catalytically active center of CYP3A4 inactivating the enzyme remains elusive. Here, the authors used molecular simulation approaches to study in detail how diquinone methide (DQR), the metabolite product of raloxifene, unbinds from CYP3A4 and inactivates the enzyme at the atomistic level. The results clearly indicate that in one of the intermediate states formed in its unbinding process, DQR covalently binds to Cys239, a residue far away from the catalytically active center of CYP3A4, and hinders the substrate from entering or leaving the enzyme. This work therefore provides an unprecedented way of clarifying the abnormal mechanism of suicide inhibition of the CYP3A4 enzyme.

Indexed as

Cytochrome P-450 CYP3ARaloxifene HydrochlorideHumansCytochrome P-450 CYP3ARaloxifene Hydrochloride

Identifiers

PMID36457253
PMCPMC9749025
OpenAlexW4310599929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.