Evidence map›Paper›PMID 36456575›Full record

ArticleNature communications2022

The BrightEyes-TTM as an open-source time-tagging module for democratising single-photon microscopy.

Alessandro Rossetta, Eli Slenders, Mattia Donato, Sabrina Zappone, Francesco Fersini, Martina Bruno, Francesco Diotalevi, Luca Lanzanò, Sami Koho, Giorgio Tortarolo and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Alessandro Rossetta *Molecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.
Eli Slenders *Molecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.
Mattia Donato *Molecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.ORCID 0000-0003-0026-747X
Sabrina ZapponeMolecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.ORCID 0000-0003-2695-4999
Francesco FersiniMolecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.ORCID 0000-0003-1534-5274
Martina BrunoSynaptic Plasticity of Inhibitory Networks, Istituto Italiano di Tecnologia, Via Morego, 30, Genoa, 16163, Italy.
Francesco DiotaleviElectronic Design Laboratory, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.
Luca LanzanòNanoscopy and NIC@IIT, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.
Sami KohoMolecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.
Giorgio TortaroloMolecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.
Andrea BarberisSynaptic Plasticity of Inhibitory Networks, Istituto Italiano di Tecnologia, Via Morego, 30, Genoa, 16163, Italy.
Marco CrepaldiElectronic Design Laboratory, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.ORCID 0000-0002-5881-3720
Eleonora PeregoMolecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy.ORCID 0000-0002-1700-584X
Giuseppe VicidominiMolecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Via Enrico Melen 85, Genoa, 16152, Italy. giuseppe.vicidomini@iit.it.ORCID 0000-0002-3085-730X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fluorescence laser-scanning microscopy (LSM) is experiencing a revolution thanks to new single-photon (SP) array detectors, which give access to an entirely new set of single-photon information. Together with the blooming of new SP LSM techniques and the development of tailored SP array detectors, there is a growing need for (i) DAQ systems capable of handling the high-throughput and high-resolution photon information generated by these detectors, and (ii) incorporating these DAQ protocols in existing fluorescence LSMs. We developed an open-source, low-cost, multi-channel time-tagging module (TTM) based on a field-programmable gate array that can tag in parallel multiple single-photon events, with 30 ps precision, and multiple synchronisation events, with 4 ns precision. We use the TTM to demonstrate live-cell super-resolved fluorescence lifetime image scanning microscopy and fluorescence lifetime fluctuation spectroscopy. We expect that our BrightEyes-TTM will support the microscopy community in spreading SP-LSM in many life science laboratories.

Indexed as

Neoplasms, Squamous CellSkin NeoplasmsHumansMicroscopy, ConfocalPhotons

Identifiers

PMID36456575
PMCPMC9715684

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.