Evidence map›Paper›PMID 36455589›Full record

ArticleCancer discovery2023

Mutant NPM1 Hijacks Transcriptional Hubs to Maintain Pathogenic Gene Programs in Acute Myeloid Leukemia.

Xue Qing David Wang, Dandan Fan, Qinyu Han, Yiman Liu, Hongzhi Miao, Xinyu Wang, Qinglan Li, Dong Chen, Haley Gore, Pamela Himadewi and 7 more

Open access · hybridAbstract readEditorialComment
In one paragraph

Article in Cancer discovery, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed, 1 pooled it
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

  1. Pooled it
  2. Ziftomenib in Relapsed or RefractoryJournal of clinical oncology : official journal of the American Society of Clinical Oncology · 2025
    Trial
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  6. Article
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  14. Current Challenges of Transcription Compartmentalization Research.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  15. Review
  16. Article
  17. Article
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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Xue Qing David Wang *Department of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan.ORCID 0000-0003-4951-5788
Dandan Fan *Institute of Biomedical Big Data, Wenzhou Medical University, Wenzhou, China.ORCID 0000-0002-1471-1183
Qinyu Han *Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California.ORCID 0000-0003-3464-8967
Yiman Liu *Department of Cancer Biology and Abramson Family Cancer Research Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.ORCID 0000-0002-2223-7223
Hongzhi MiaoDepartment of Pathology, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-4862-9484
Xinyu WangInstitute of Biomedical Big Data, Wenzhou Medical University, Wenzhou, China.ORCID 0000-0003-0806-4335
Qinglan LiDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California.ORCID 0000-0003-0160-8774
Dong ChenDepartment of Pathology, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-2210-1024
Haley GoreDepartment of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan.ORCID 0000-0001-8993-6611
Pamela HimadewiDepartment of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan.ORCID 0000-0001-5721-1974
Gerd P PfeiferDepartment of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan.ORCID 0000-0002-5080-9604
Tomasz CierpickiDepartment of Pathology, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-2058-0658
Jolanta GrembeckaDepartment of Pathology, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-6180-9095
Jianzhong Su *Institute of Biomedical Big Data, Wenzhou Medical University, Wenzhou, China.ORCID 0000-0003-1054-6042
Shasha Chong *Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California.ORCID 0000-0002-5372-311X
Liling Wan *Department of Cancer Biology and Abramson Family Cancer Research Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.ORCID 0000-0002-5444-0437
Xiaotian Zhang *Department of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan.ORCID 0000-0002-9533-4761
Van Andel Institute · USUniversity of Michigan · USCalifornia Institute of Technology · USUPMC Hillman Cancer Center · USWenzhou Medical University · CN

Funding

Development of novel anti-leukemia agents targeting the menin-MLL interactionR01CA160467 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GREMBECKA, JOLANTA · 2011 to 2021
$3.4M
Illuminating transcriptional condensates using an integrated approachDP2HG012443 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI WAN, LILING · 2021 to 2024
$2.4M
Development of small molecules targeting Ring1B-Bmi1 E3 ligase in leukemiaR01CA207272 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CIERPICKI, TOMASZ · 2016 to 2020
$2.0M
Targeting epigenetic reader GAS41R01CA240514 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CIERPICKI, TOMASZ · 2020 to 2023
$2.0M
Transcriptional control by the epigenetic reader ENL in human cancerR00CA226399 · NCI · UNIVERSITY OF PENNSYLVANIA · PI WAN, LILING · 2020 to 2022
$747k
Transcriptional control by the epigenetic reader ENL in human cancerK99CA226399 · NCI · ROCKEFELLER UNIVERSITY · PI WAN, LILING · 2018 to 2019
$294k
NCI NIH HHS K99 CA226399NCI NIH HHS R00 CA226399NCI NIH HHS R01 CA160467NCI NIH HHS R01 CA207272NCI NIH HHS R01 CA240514NHGRI NIH HHS DP2 HG012443
6 · The paper itself

Abstract

Nucleophosmin (NPM1) is a ubiquitously expressed nucleolar protein with a wide range of biological functions. In 30% of acute myeloid leukemia (AML), the terminal exon of NPM1 is often found mutated, resulting in the addition of a nuclear export signal and a shift of the protein to the cytoplasm (NPM1c). AMLs carrying this mutation have aberrant expression of the HOXA/B genes, whose overexpression leads to leukemogenic transformation. Here, for the first time, we comprehensively prove that NPM1c binds to a subset of active gene promoters in NPM1c AMLs, including well-known leukemia-driving genes-HOXA/B cluster genes and MEIS1. NPM1c sustains the active transcription of key target genes by orchestrating a transcription hub and maintains the active chromatin landscape by inhibiting the activity of histone deacetylases. Together, these findings reveal the neomorphic function of NPM1c as a transcriptional amplifier for leukemic gene expression and open up new paradigms for therapeutic intervention. SIGNIFICANCE: NPM1 mutation is the most common mutation in AML, yet the mechanism of how the mutant protein results in AML remains unclear. Here, for the first time, we prove mutant NPM1 directly binds to active chromatin regions and hijacks the transcription of AML-driving genes. See related article by Uckelmann et al., p. 746. This article is highlighted in the In This Issue feature, p. 517.

Indexed as

Leukemia, Myeloid, AcuteNucleophosminChromatinHumansMutationNuclear ProteinsChromatinNuclear ProteinsNucleophosmin

Identifiers

PMID36455589
PMCPMC9975662
OpenAlexW4310602693

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.