Evidence map›Paper›PMID 36453153›Full record

ArticleEnvironmental microbiology2023

Coupled C, H, N, S and Fe biogeochemical cycles operating in the continental deep subsurface of the Iberian Pyrite Belt.

Ricardo Amils, Cristina Escudero, Monike Oggerin, Fernando Puente Sánchez, Alejandro Arce Rodríguez, David Fernández Remolar, Nuria Rodríguez, Miriam García Villadangos, José Luis Sanz, Carlos Briones and 11 more

Abstract read
In one paragraph

Article in Environmental microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Draft genome sequence of the deep-subsurfaceMicrobiology resource announcements · 2024
    Article
  5. Article
  6. Metal tolerance of Río Tinto fungi.Frontiers in fungal biology · 2024
    Article
  7. Vitamin BGenes · 2023
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Ricardo AmilsCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.ORCID 0000-0002-7560-1033
Cristina EscuderoCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Monike OggerinCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Fernando Puente SánchezCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Alejandro Arce RodríguezInstitute of Microbiology, Technical University Braunschweig, Germany.
David Fernández RemolarCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Nuria RodríguezCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Miriam García VilladangosCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
José Luis SanzDepartment of Molecular Biology, Universidad Autónoma de Madrid, Madrid, Spain.
Carlos BrionesCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Mónica Sánchez-RománCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Felipe GómezCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Tania LeandroCentro de Biología Molecular Severo Ochoa (CSIC-UAM), Universidad Autónoma de Madrid, Madrid, Spain.
Mercedes Moreno-PazCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Olga Prieto-BallesterosCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Antonio MolinaCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Fernando TornosCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.
Irene Sánchez-AndreaDepartment of Microbiology, Wageningen University, Netherlands.
Kenneth TimmisInstitute of Microbiology, Technical University Braunschweig, Germany.
Dietmar H PieperMicrobial Interactions and Processes Research Group, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Victor ParroCentro de Astrobiología (CSIC-INTA), Torrejón de Ardoz, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial activity is a major contributor to the biogeochemical cycles that make up the life support system of planet Earth. A 613 m deep geomicrobiological perforation and a systematic multi-analytical characterization revealed an unexpected diversity associated with the rock matrix microbiome that operates in the subsurface of the Iberian Pyrite Belt (IPB). Members of 1 class and 16 genera were deemed the most representative microorganisms of the IPB deep subsurface and selected for a deeper analysis. The use of fluorescence in situ hybridization allowed not only the identification of microorganisms but also the detection of novel activities in the subsurface such as anaerobic ammonium oxidation (ANAMMOX) and anaerobic methane oxidation, the co-occurrence of microorganisms able to maintain complementary metabolic activities and the existence of biofilms. The use of enrichment cultures sensed the presence of five different complementary metabolic activities along the length of the borehole and isolated 29 bacterial species. Genomic analysis of nine isolates identified the genes involved in the complete operation of the light-independent coupled C, H, N, S and Fe biogeochemical cycles. This study revealed the importance of nitrate reduction microorganisms in the oxidation of iron in the anoxic conditions existing in the subsurface of the IPB.

Indexed as

BacteriaMicrobiotaIn Situ Hybridization, FluorescenceIronOxidation-ReductionSulfidesIronpyriteSulfides

Identifiers

PMID36453153
PMCPMC10107794

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.