Evidence map›Paper›PMID 36451195›Full record

ReviewFrontiers in zoology2022

Sequencing and assembling bear genomes: the bare necessities.

Courtney Willey, Ron Korstanje

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in zoology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Cell and developmental biology: grand challenges.Frontiers in cell and developmental biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Courtney WilleyThe Jackson Laboratory, Bar Harbor, ME, 04609, USA.
Ron KorstanjeThe Jackson Laboratory, Bar Harbor, ME, 04609, USA. ron.korstanje@jax.org.ORCID http://orcid.org/0000-0002-2808-1610
Jackson Laboratory · US

Funding

Translational CoreP30AG038070 · NIA · JACKSON LABORATORY · PI Gary A Churchill · 2010 to 2026
$19.3M
Genetic Factors that Influence Arsenic ToxicityR01ES029916 · NIEHS · JACKSON LABORATORY · PI CHURCHILL, GARY A, KORSTANJE, RONNY · 2019 to 2023
$3.6M
Causal connections between axon guidance proteins and early progressive kidney function decline in diabetesR01DK131061 · NIDDK · JOSLIN DIABETES CENTER · PI KROLEWSKI, ANDRZEJ S · 2022 to 2025
$2.7M
Identification of Kidney Disease Modifier Genes in Mouse and Human Alport SyndromeR01DK131019 · NIDDK · JACKSON LABORATORY · PI KORSTANJE, RONNY · 2022 to 2025
$1.5M
NIA NIH HHS AG038070NIA NIH HHS P30 AG038070NIDDK NIH HHS DK131019NIDDK NIH HHS DK131061NIDDK NIH HHS R01 DK131061NIEHS NIH HHS ES29916NIEHS NIH HHS R01 ES029916
6 · The paper itself

Abstract

Unique genetic adaptations are present in bears of every species across the world. From (nearly) shutting down important organs during hibernation to preventing harm from lifestyles that could easily cause metabolic diseases in humans, bears may hold the answer to various human ailments. However, only a few of these unique traits are currently being investigated at the molecular level, partly because of the lack of necessary tools. One of these tools is well-annotated genome assemblies from the different, extant bear species. These reference genomes are needed to allow us to identify differences in genetic variants, isoforms, gene expression, and genomic features such as transposons and identify those that are associated with biomedical-relevant traits. In this review we assess the current state of the genome assemblies of the eight different bear species, discuss current gaps, and the future benefits these reference genomes may have in informing human biomedical applications, while at the same time improving bear conservation efforts.

Indexed as

BearGene expressionGenomeSequenceUrsidae

Identifiers

PMID36451195
PMCPMC9710173
OpenAlexW4310568089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.