Evidence map›Paper›PMID 36446883›Full record

ArticleScientific reports2022

Sensitive and rapid detection of Babesia species in dogs by recombinase polymerase amplification with lateral flow dipstick (RPA-LFD).

Warunya Onchan, Onchira Ritbamrung, Phanupong Changtor, Waranee Pradit, Siriwadee Chomdej, Korakot Nganvongpanit, Puntita Siengdee, Urasri Suyasunanont, Kittisak Buddhachat

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

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  12. Rapid and Ultrasensitive Detection ofMolecules (Basel, Switzerland) · 2024
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  13. Article
  14. Real-Time Monitoring on the Chinese Giant Salamander Using RPA-LFD.International journal of molecular sciences · 2024
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Warunya OnchanDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Onchira RitbamrungDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Phanupong ChangtorDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Waranee PraditDepartment of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
Siriwadee ChomdejDepartment of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
Korakot NganvongpanitExcellence Center in Veterinary Bioscience, Chiang Mai University, Chiang Mai, 50200, Thailand.
Puntita SiengdeeDepartment of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
Urasri SuyasunanontDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Kittisak BuddhachatDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand. kittisakbu@nu.ac.th.
Chiang Mai University · THNaresuan University · THChulabhorn Graduate Institute · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Canine babesiosis is a tick-borne disease caused by Babesia spp., which infects and destroys healthy erythrocytes, leading to mortality and morbidity in dogs. The diagnosis of babesiosis is tedious and time-consuming, especially in latent and chronic infections. Here, a recombinase polymerase amplification combined with a lateral flow dipstick (RPA-LFD) assay was developed for rapid and accurate detection of Babesia spp. in canine blood specimens based on the 18S rRNA region. The RPA-LFD assay using rpaBab264 gave specificity to Babesia spp. in dogs (B. vogeli and B. gibsoni) without cross-amplification to other parasites (apicomplexans and non-apicomplexans), with detection limit of at least 22.5 copies/μl (0.1 fg/µl) at 40 °C for at least 10 min. The whole process of DNA amplification by RPA and readout by LFD did not exceed 30 min. To determine the performance of the RPA-LFD assay, a total of 30 clinical samples was examined and compared with conventional PCR (cPCR) and multiplex HRM (mHRM). Eight dogs (26.67%) were detected as positive by RPA-LFD, while seven and six were found positive by cPCR and mHRM, respectively. RPA-LFD and cPCR showed high agreement with Babesia spp. detection with kappa > 0.9. We confirmed that the dogs were infected by B. vogeli from sequences of positive PCR results. Our findings suggested that RPA-LFD using the rpaBab264 assay offered a rapid, accurate, cost-effective and simple method for Babesia spp. detection that is feasibly applicable to be rapid kit at a pet hospital or point-of-care testing.

Indexed as

BabesiaBabesiosisAnimalsDogsNucleotidyltransferasesPolymerase Chain ReactionRecombinasesNucleotidyltransferasesRecombinases

Identifiers

PMID36446883
PMCPMC9707278
OpenAlexW4310241418

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.