Evidence map›Paper›PMID 36442107›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Integrative analysis reveals structural basis for transcription activation of Nurr1 and Nurr1-RXRα heterodimer.

Mohan Zhao, Na Wang, Yaoting Guo, Jingwen Li, Yue Yin, Yan Dong, Jiabin Zhu, Chao Peng, Tingting Xu, Jinsong Liu

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Mohan ZhaoState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.
Na WangState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.
Yaoting GuoState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.
Jingwen LiNational Facility for Protein Science in Shanghai, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201210, China.
Yue YinNational Facility for Protein Science in Shanghai, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201210, China.
Yan DongState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.
Jiabin ZhuState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.ORCID 0000-0002-9034-3298
Chao PengNational Facility for Protein Science in Shanghai, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201210, China.ORCID 0000-0002-6814-2676
Tingting XuState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.ORCID 0000-0002-1826-2012
Jinsong LiuState Key Laboratory of Respiratory Disease, Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.ORCID 0000-0003-2317-0558
Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Orphan nuclear receptor Nurr1 plays important roles in the progression of various diseases, including Parkinson's disease, neuroinflammation, Alzheimer's disease, and multiple sclerosis. It can recognize DNA as a monomer or heterodimer with retinoid X receptor α (RXRα). But the molecular mechanism of its transcriptional activity regulation is still largely unknown. Here we obtained a crystal structure of monomer Nurr1 (DNA- and ligand-binding domains, DBD and LBD) bound to NGFI-B response element. The structure exhibited two different forms with distinct DBD orientations, unveiling the conformational flexibility of nuclear receptor monomer. We then generated an integrative model of Nurr1-RXRα heterodimer. In the context of heterodimer, the structural flexibility of Nurr1 would contribute to its transcriptional activity modulation. We demonstrated that the DNA sequence may specifically modulate the transcriptional activity of Nurr1 in the absence of RXRα agonist, but the modulation can be superseded when the agonist binds to RXRα. Together, we propose a set of signaling pathways for the constitutive transcriptional activation of Nurr1 and provide molecular mechanisms for therapeutic discovery targeting Nurr1 and Nurr1-RXRα heterodimer.

Indexed as

Response ElementsRetinoid X Receptor alphaNuclear Receptor Subfamily 4, Group A, Member 2Protein DomainsTranscriptional ActivationNuclear Receptor Subfamily 4, Group A, Member 2Retinoid X Receptor alphaintegrative analysisNurr1Nurr1-RXRα heterodimer

Identifiers

PMID36442107
PMCPMC9894219
OpenAlexW4310460299

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.