Evidence map›Paper›PMID 36438550›Full record

ArticleFrontiers in cell and developmental biology2022

Single-cell RNA sequence presents atlas analysis for chondrocytes in the talus and reveals the potential mechanism in coping with mechanical stress.

Tianrui Wang, Junjie Wang, Zewen Sun, Lu Zhang, Chenghao Yu, Haibo Zhao, Mingyue Yan, Shenjie Sun, Zhenhao Ye, Yingze Zhang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Tianrui WangDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Junjie WangDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Zewen SunDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Lu ZhangMedical Research Center, Institute of Orthopaedics and Traumatology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Chenghao YuDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Haibo ZhaoDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Mingyue YanDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Shenjie SunDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Zhenhao YeLC-Bio Technologies, Co., Ltd., Hangzhou, China.
Yingze ZhangDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Tengbo YuDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Qingdao University · CNAffiliated Hospital of Qingdao University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chondrocytes are indispensable for the function of cartilage because they provide the extracellular matrix. Therefore, gaining insight into the chondrocytes may be helpful in understanding cartilage function and pinpointing potential therapeutical targets for diseases. The talus is a part of the ankle joint, which serves as the major large joint that bears body weight. Compared with the distal tibial and fibula, the talus bears much more mechanical loading, which is a risk factor for osteoarthritis (OA). However, in most individuals, OA seems to be absent in the ankle, and the cartilage of the talus seems to function normally. This study applied single-cell RNA sequencing to demonstrate atlas for chondrocyte subsets in healthy talus cartilage obtained from five volunteers, and chondrocyte subsets were annotated. Gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses for each cell type, cell-cell interactions, and single-cell regulatory network inference and clustering for each cell type were conducted, and hub genes for each cell type were identified. Immunohistochemical staining was used to confirm the presence and distribution of each cell type. Two new chondrocyte subsets were annotated as MirCs and SpCs. The identified and speculated novel microenvironment may pose different directions in chondrocyte composition, development, and metabolism in the talus.

Indexed as

cartilagechondrocytemechanical stresssingle-cell RNA sequencingtalus

Identifiers

PMID36438550
PMCPMC9685414
OpenAlexW4308870374

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.